RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 CCDC168Q8NDH2 2452 aa10.99□□□□□ -0.65
TRIM56-201ENST00000306085 LINC01551Q86U37 167 aa10.99□□□□□ -0.65
TRIM56-201ENST00000306085 FBLIM1Q8WUP2 373 aa10.99□□□□□ -0.65
TRIM56-201ENST00000306085 SIPA1L3O60292 1781 aaPredicted RBP10.99□□□□□ -0.65
TRIM56-201ENST00000306085 PPP1R32Q7Z5V6 425 aa10.99□□□□□ -0.65
TRIM56-201ENST00000306085 TMEM131Q92545 1883 aa10.99□□□□□ -0.65
TRIM56-201ENST00000306085 AGMATQ9BSE5 352 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 SMRP1Q8NCR6 262 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 IGHV1-2P23083 117 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 TRBV6-7A0A0A0MS04 114 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 PIP4P2Q8N4L2 257 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 H3BMG7 143 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 I3L3M4 83 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 ACYP1P07311 99 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 A0A1B0GWJ7 208 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 F6UB75 175 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 ZNF664Q8N3J9 261 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 C1QTNF5Q9BXJ0 243 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 TREML4Q6UXN2 200 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 CACNA1AO00555 2505 aa10.98□□□□□ -0.65
TRIM56-201ENST00000306085 TEX48A0A1B0GUV7 120 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 COLCA2A8K830 154 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 CFHR2P36980 270 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 DKK4Q9UBT3 224 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 K7EP34 96 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■□□ 16.3
TRIM56-201ENST00000306085 KNCNA6PVL3 124 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 PYY3Q5JQD4 70 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 TRBV24-1A0A075B6N3 115 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 CEND1Q8N111 149 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
TRIM56-201ENST00000306085 TMEM141Q96I45 108 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 TRGV9Q99603 122 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 J3KT08 172 aa10.97□□□□□ -0.65
TRIM56-201ENST00000306085 SLC25A45Q8N413 288 aa10.96□□□□□ -0.65
TRIM56-201ENST00000306085 ORMDL1Q9P0S3 153 aa10.96□□□□□ -0.65
TRIM56-201ENST00000306085 CFHR4Q92496 578 aa10.96□□□□□ -0.65
TRIM56-201ENST00000306085 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.96□□□□□ -0.65
TRIM56-201ENST00000306085 IGKV1-5P01602 117 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 VWC2Q2TAL6 325 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 SHANK3Q9BYB0 1731 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 MYO9AB2RTY4 2548 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 A0A0A6YYD4 124 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 PRO1854Q9UHT4 67 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 MRPL23Q16540 153 aaKnown RBP10.96□□□□□ -0.66
TRIM56-201ENST00000306085 MRPL55Q7Z7F7 128 aaKnown RBP10.96□□□□□ -0.66
TRIM56-201ENST00000306085 FAM181AQ8N9Y4 354 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 A0A1W2PPM0 123 aa10.96□□□□□ -0.66
TRIM56-201ENST00000306085 LINC01590Q5TEZ4 76 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 C10orf55Q5SWW7 151 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 IGHV2-26A0A0B4J1V2 119 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 RPL18AQ02543 176 aaKnown RBP10.95□□□□□ -0.66
TRIM56-201ENST00000306085 C3orf56Q8N813 242 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 OR11H6Q8NGC7 330 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 TNRC6CQ9HCJ0 1690 aaKnown RBP10.95□□□□□ -0.66
TRIM56-201ENST00000306085 ID3Q02535 119 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 NDUFA12Q9UI09 145 aa10.95□□□□□ -0.66
TRIM56-201ENST00000306085 IGHV3-38A0A0C4DH36 116 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 IL17RELQ6ZVW7 336 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 KLHDC3Q9BQ90 382 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 KLK9Q9UKQ9 250 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 PROP1O75360 226 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 RNASE13Q5GAN3 156 aaKnown RBP10.94□□□□□ -0.66
TRIM56-201ENST00000306085 CDKN1BP46527 198 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 C8orf49Q96NF6 230 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 TIMM17AQ99595 171 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 LRP5O75197 1615 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 C9orf139Q6ZV77 190 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 IGFBPL1Q8WX77 278 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 RMI2Q96E14 147 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 PLXNB3Q9ULL4 1909 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 XCL2Q9UBD3 114 aa10.94□□□□□ -0.66
TRIM56-201ENST00000306085 A0A1B0GX51 115 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 GATA4P43694 442 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 PLXNA2O75051 1894 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 TRAV26-2A0A0B4J265 109 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
TRIM56-201ENST00000306085 RNF183Q96D59 192 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 ANGP03950 147 aaKnown RBP10.93□□□□□ -0.66
TRIM56-201ENST00000306085 ZNF329Q86UD4 541 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 M0R1W7 72 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 TMEM190Q8WZ59 177 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 U3KQE9 123 aa10.93□□□□□ -0.66
TRIM56-201ENST00000306085 A0A096LPF7 62 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 NRXN3Q9Y4C0 1643 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 TGFBR3LH3BV60 316 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 CHCHD2Q9Y6H1 151 aaPredicted RBP10.92□□□□□ -0.66
TRIM56-201ENST00000306085 A0A1B0GUS0 222 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 BAALC-AS2P0C853 105 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 RNASE6Q93091 150 aaKnown RBP10.92□□□□□ -0.66
TRIM56-201ENST00000306085 VWA8A3KMH1 1905 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 IGLC2P0DOY2 106 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 IGLC3P0DOY3 106 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 BRD3OSQ6XYD6 125 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 C4orf51C9J302 202 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 TIAF1O95411 115 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 SPINK13Q1W4C9 94 aa10.92□□□□□ -0.66
TRIM56-201ENST00000306085 A0A1B0GTI1 187 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms