RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 GRIFINA4D1Z8 144 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 HIGD1CA8MV81 97 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 IGHV4-31P0DP07 118 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 HLA-DMBP28068 263 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 CRIP1P50238 77 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 PSG8Q9UQ74 426 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 IGHV3OR16-13A0A075B7E8 117 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 IGHV3-74A0A0B4J1X5 117 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 J3QLI3 93 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 M0QZK8 103 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 ZNF207O43670 478 aaKnown RBP5.04□□□□□ -1.6
USP47-201ENST00000305481 BRI3O95415 125 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 FSHBP01225 129 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 S100A2P29034 98 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 LINC00310P59036 64 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 RBX1P62877 108 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 CFHR3Q02985 330 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 LCNL1Q6ZST4 164 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 TCF24Q7RTU0 167 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 TMEM190Q8WZ59 177 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 RPP21Q9H633 154 aaKnown RBP5.04□□□□□ -1.6
USP47-201ENST00000305481 BEX4Q9NWD9 120 aaPredicted RBP5.04□□□□□ -1.6
USP47-201ENST00000305481 IGLV1-40P01703 118 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 TPPP2P59282 170 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 PSG9Q00887 426 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 PACRGQ96M98 296 aaPredicted RBP5.04□□□□□ -1.6
USP47-201ENST00000305481 PRO1933Q9H354 126 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 AAMDCQ9H7C9 122 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 NAT8BQ9UHF3 227 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 U3KQE9 123 aa5.04□□□□□ -1.6
USP47-201ENST00000305481 IGKV2-40A0A087WW87 121 aaPredicted RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 IGHV3-49A0A0A0MS15 119 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 ZNF705FA8MVS1 300 aaPredicted RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 F2Z2F3 143 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 CIDEAO60543 219 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 IGKV2D-40P01614 121 aaPredicted RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 P01737 135 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 ZNF25P17030 456 aaPredicted RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 NUTF2P61970 127 aaKnown RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 ODF1Q14990 250 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 HIST2H2BCQ6DN03 193 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 RNASE8Q8TDE3 154 aaKnown RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 WIPF2Q8TF74 440 aaPredicted RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 C8orf49Q96NF6 230 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 ATP6V0BQ99437 205 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 ZNF331Q9NQX6 463 aaPredicted RBP5.03□□□□□ -1.6
USP47-201ENST00000305481 ZFP30Q9Y2G7 519 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 CREBBPQ92793 2442 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 A0A087X0K7 114 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 SLAQ13239 276 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 KIAA1644Q3SXP7 199 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 CT83Q5H943 113 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 UNQ9165/PRO28630Q6UXU0 137 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 LRRC75A-AS1Q8N1F1 130 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 GBGT1Q8N5D6 347 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 A0A1B0GXF2 115 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 CHEK1O14757 476 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 ZNF253O75346 499 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 GZMBP10144 247 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 RAB4BP61018 213 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 WDR73Q6P4I2 378 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 RNF182Q8N6D2 247 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 VGLL1Q99990 258 aa5.03□□□□□ -1.6
USP47-201ENST00000305481 DOPEY2Q9Y3R5 2298 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 HELZ2Q9BYK8 2649 aaKnown RBP5.02□□□□□ -1.61
USP47-201ENST00000305481 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.02□□□□□ -1.61
USP47-201ENST00000305481 H3BUA1 57 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 K7EQM0 130 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 IGHV3-11P01762 117 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 MT-ND6P03923 174 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 CRISP2P16562 243 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 ARL3P36405 182 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 RPL19P84098 196 aaKnown RBP5.02□□□□□ -1.61
USP47-201ENST00000305481 PRR31Q5SQ13 230 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 DMRTA1Q5VZB9 504 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 REC114Q7Z4M0 266 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 ITPR3Q14573 2671 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 TRAV8-2A0A0B4J237 113 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 A8MWL6 223 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 PRAC2D3DTV9 90 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 PF4V1P10720 104 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 C1orf194Q5T5A4 169 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 LCN12Q6JVE5 192 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 RASL11AQ6T310 242 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 C10orf99Q6UWK7 81 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 DAZAP1Q96EP5 407 aaKnown RBP5.02□□□□□ -1.61
USP47-201ENST00000305481 USMG5Q96IX5 58 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 Q96MF0 132 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 METTL26Q96S19 204 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 PRDM13Q9H4Q3 707 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 PDZD2O15018 2839 aa5.02□□□□□ -1.61
USP47-201ENST00000305481 PRRC2AP48634 2157 aaKnown RBP5.02□□□□□ -1.61
USP47-201ENST00000305481 EREGO14944 169 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 HLA-DQA1P01909 254 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 CSN1S1P47710 185 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 RAB9AP51151 201 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 Q0VG73 95 aa5.01□□□□□ -1.61
USP47-201ENST00000305481 COX19Q49B96 90 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms