RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 NDUFS5O43920 106 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 RPP25LQ8N5L8 163 aaKnown RBP13.53□□□□□ -0.24
PDS5A-201ENST00000303538 SPOCK3Q9BQ16 436 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 LY6G5BQ8NDX9 201 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 hDV102S1A0JD36 115 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 FAM90A2PQ658T7 463 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 ZNF581Q9P0T4 197 aa13.53□□□□□ -0.24
PDS5A-201ENST00000303538 BCL6BQ8N143 479 aaPredicted RBP13.52□□□□□ -0.24
PDS5A-201ENST00000303538 CARHSP1Q9Y2V2 147 aaKnown RBP13.52□□□□□ -0.24
PDS5A-201ENST00000303538 TAL2Q16559 108 aa13.52□□□□□ -0.24
PDS5A-201ENST00000303538 NUP35Q8NFH5 326 aa13.52□□□□□ -0.24
PDS5A-201ENST00000303538 TNFRSF6BO95407 300 aa13.52□□□□□ -0.24
PDS5A-201ENST00000303538 ATRAIDQ6UW56 229 aa13.52□□□□□ -0.24
PDS5A-201ENST00000303538 WISP1O95388 367 aa13.52□□□□□ -0.25
PDS5A-201ENST00000303538 GAS1P54826 345 aa13.52□□□□□ -0.25
PDS5A-201ENST00000303538 LCTP09848 1927 aa13.52□□□□□ -0.25
PDS5A-201ENST00000303538 GLRX5Q86SX6 157 aa13.52□□□□□ -0.25
PDS5A-201ENST00000303538 LINC00518Q8N0U6 118 aa13.52□□□□□ -0.25
PDS5A-201ENST00000303538 LYPD3O95274 346 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 LINC01549A6NIU2 74 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 NDUFB8O95169 186 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 GUSBP1Q15486 140 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 TRPT1Q86TN4 253 aaKnown RBP13.51□□□□□ -0.25
PDS5A-201ENST00000303538 DNAJC30Q96LL9 226 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 IGKV1-39P01597 117 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 IGKV1D-39P04432 117 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 RMI2Q96E14 147 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 ZNF362Q5T0B9 420 aaPredicted RBP13.51□□□□□ -0.25
PDS5A-201ENST00000303538 ANK1P16157 1881 aa13.51□□□□□ -0.25
PDS5A-201ENST00000303538 IGHV2-70DA0A0C4DH43 119 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 C8orf49Q96NF6 230 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 Q6P435 159 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 LINC00479Q96M42 142 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.5□□□□□ -0.25
PDS5A-201ENST00000303538 RNF144BQ7Z419 303 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 PRSS29PA6NIE9 313 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 SMPXQ9UHP9 88 aa13.5□□□□□ -0.25
PDS5A-201ENST00000303538 TMEM256Q8N2U0 113 aa13.49□□□□□ -0.25
PDS5A-201ENST00000303538 IGHG3P01860 377 aa13.49□□□□□ -0.25
PDS5A-201ENST00000303538 HSD52Q0P140 79 aa13.49□□□□□ -0.25
PDS5A-201ENST00000303538 A0A1W2PPI3 338 aa13.49□□□□□ -0.25
PDS5A-201ENST00000303538 DEFB105AQ8NG35 78 aa13.49□□□□□ -0.25
PDS5A-201ENST00000303538 TMEM242Q9NWH2 141 aa13.48□□□□□ -0.25
PDS5A-201ENST00000303538 A0A087X0K7 114 aa13.48□□□□□ -0.25
PDS5A-201ENST00000303538 LY6G6FQ5SQ64 297 aa13.48□□□□□ -0.25
PDS5A-201ENST00000303538 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
PDS5A-201ENST00000303538 MMP23AO75900 390 aa13.48□□□□□ -0.25
PDS5A-201ENST00000303538 RNASE2P10153 161 aaKnown RBP13.48□□□□□ -0.25
PDS5A-201ENST00000303538 TP53TG1Q9Y2A0 90 aa13.48□□□□□ -0.25
PDS5A-201ENST00000303538 A0A0G2JMZ2 1700 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 LRRC37A2A6NM11 1700 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 AMBPP02760 352 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 H3BMM0 161 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 UBE2WQ96B02 151 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 ATP6V0BQ99437 205 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 GFI1Q99684 422 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 B3GALT5-AS1P59052 145 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 IGFBPL1Q8WX77 278 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 GBF1Q92538 1859 aa13.47□□□□□ -0.25
PDS5A-201ENST00000303538 DEFB136Q30KP8 78 aa13.46□□□□□ -0.25
PDS5A-201ENST00000303538 DUX4L9Q6RFH8 374 aaPredicted RBP13.46□□□□□ -0.25
PDS5A-201ENST00000303538 SCRT2Q9NQ03 307 aa13.46□□□□□ -0.25
PDS5A-201ENST00000303538 TNCP24821 2201 aa13.46□□□□□ -0.25
PDS5A-201ENST00000303538 Q6ZQT7 251 aa13.46□□□□□ -0.25
PDS5A-201ENST00000303538 PNRC2Q9NPJ4 139 aaKnown RBP13.46□□□□□ -0.25
PDS5A-201ENST00000303538 LTBP1Q14766 1721 aa13.46□□□□□ -0.25
PDS5A-201ENST00000303538 SHANK1Q9Y566 2161 aa13.46□□□□□ -0.26
PDS5A-201ENST00000303538 RALGAPA2Q2PPJ7 1873 aa13.46□□□□□ -0.26
PDS5A-201ENST00000303538 FAM120AOSQ5T036 256 aa13.46□□□□□ -0.26
PDS5A-201ENST00000303538 ZSWIM8A7E2V4 1837 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 GSN-AS1Q9NRJ2 163 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 MED13LQ71F56 2210 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 RNASE13Q5GAN3 156 aaKnown RBP13.45□□□□□ -0.26
PDS5A-201ENST00000303538 ZC2HC1BQ5TFG8 222 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 FBLN5Q9UBX5 448 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 CSRP3P50461 194 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 hADV29S1A0JD25 119 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BKO60814 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BJP06899 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BOP23527 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BBP33778 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BDP58876 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BCP62807 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 GAGE2BQ13066 116 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST2H2BEQ16778 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.45□□□□□ -0.26
PDS5A-201ENST00000303538 NEGR1Q7Z3B1 354 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BHQ93079 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BNQ99877 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 HIST1H2BMQ99879 126 aa13.45□□□□□ -0.26
PDS5A-201ENST00000303538 IGHV1OR15-1A0A075B7D0 117 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 TMEM213A2RRL7 107 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 TRAV26-2A0A0B4J265 109 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 NOP10Q9NPE3 64 aaKnown RBP13.44□□□□□ -0.26
PDS5A-201ENST00000303538 SHANK2-AS3Q9BTD1 123 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 PTPRDP23468 1912 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 BTCP35070 178 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 CD5LO43866 347 aa13.44□□□□□ -0.26
PDS5A-201ENST00000303538 TEX36Q5VZQ5 186 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms