RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 IL17RELQ6ZVW7 336 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 CHAC1Q9BUX1 264 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 IGKV1-39P01597 117 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 IGKV1D-39P04432 117 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 STPG4Q8N801 248 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 ZNF492Q9P255 531 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 ATP6V0E1O15342 81 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 RUSC1-AS1Q66K80 236 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 POLR3KQ9Y2Y1 108 aaPredicted RBP11.22□□□□□ -0.61
PRKCB-201ENST00000303531 CFHR2P36980 270 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 PRR30Q53SZ7 412 aaPredicted RBP11.22□□□□□ -0.61
PRKCB-201ENST00000303531 DUX4L9Q6RFH8 374 aaPredicted RBP11.22□□□□□ -0.61
PRKCB-201ENST00000303531 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 DLX4Q92988 240 aaPredicted RBP11.22□□□□□ -0.61
PRKCB-201ENST00000303531 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 SYNJ2BPP57105 145 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 UBE2V1Q13404 147 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
PRKCB-201ENST00000303531 ATRXP46100 2492 aa11.21□□□□□ -0.61
PRKCB-201ENST00000303531 ESDP10768 282 aa11.21□□□□□ -0.61
PRKCB-201ENST00000303531 MRPL52Q86TS9 123 aaKnown RBP11.21□□□□□ -0.61
PRKCB-201ENST00000303531 GATA4P43694 442 aa11.21□□□□□ -0.61
PRKCB-201ENST00000303531 Q8TCH9 128 aa11.21□□□□□ -0.61
PRKCB-201ENST00000303531 TRAV13-1A0A0B4J241 112 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.21□□□□□ -0.62
PRKCB-201ENST00000303531 NDUFB8O95169 186 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 C17orf58Q2M2W7 97 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 SPXQ9BT56 116 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 TIMM21Q9BVV7 248 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 LY6G6EA0A0G2JKS1 128 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 EREGO14944 169 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 U3KQA8 63 aa11.21□□□□□ -0.62
PRKCB-201ENST00000303531 GAGE2BQ13066 116 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 GAGE2EQ4V326 116 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 GAGE2DQ9UEU5 116 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 USF3Q68DE3 2245 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 FAM110DQ8TAY7 271 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-201ENST00000303531 C2orf82Q6UX34 121 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 YPEL3P61236 119 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-201ENST00000303531 LINC01356Q8N9X3 169 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 DTX1Q86Y01 620 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 DKK1O94907 266 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 SPAG8Q99932 426 aaPredicted RBP11.2□□□□□ -0.62
PRKCB-201ENST00000303531 CREBBPQ92793 2442 aa11.2□□□□□ -0.62
PRKCB-201ENST00000303531 TRBV19A0A075B6N1 114 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 CD5LO43866 347 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 UBE2E1P51965 193 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 A8MWP6 167 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 PLXNA4Q9HCM2 1894 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 C6orf226Q5I0X4 101 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 MYMXA0A1B0GTQ4 84 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 ZFAND6Q6FIF0 208 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 FAM231BA6NCW3 169 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 CT83Q5H943 113 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 LY6G5BQ8NDX9 201 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 HELZP42694 1942 aaKnown RBP11.19□□□□□ -0.62
PRKCB-201ENST00000303531 TICRRQ7Z2Z1 1910 aa11.19□□□□□ -0.62
PRKCB-201ENST00000303531 PRSS46E5RG02 174 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 DEFB131AP59861 70 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 SLC25A16P16260 332 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
PRKCB-201ENST00000303531 CHD3Q12873 2000 aaKnown RBP11.18□□□□□ -0.62
PRKCB-201ENST00000303531 TSC2P49815 1807 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 FAM104BQ5XKR9 115 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
PRKCB-201ENST00000303531 GAGE12BA1L429 117 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 G3V318 75 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 LEPROTO15243 131 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 LGALS1P09382 135 aaKnown RBP11.17□□□□□ -0.62
PRKCB-201ENST00000303531 TRPT1Q86TN4 253 aaKnown RBP11.17□□□□□ -0.62
PRKCB-201ENST00000303531 PRIMA1Q86XR5 153 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 ZGRF1Q86YA3 2104 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 OCIAD2Q56VL3 154 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 NCOR1P1Q9H4R4 102 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 TP53TG1Q9Y2A0 90 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 V9GYV3 84 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 TRAV8-3A0A0A6YYJ7 113 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 LOXP28300 417 aaPredicted RBP11.17□□□□□ -0.62
PRKCB-201ENST00000303531 C20orf144Q9BQM9 153 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 COX11Q9Y6N1 276 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 LAMTOR3Q9UHA4 124 aa11.17□□□□□ -0.62
PRKCB-201ENST00000303531 C15orf65H3BRN8 121 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 KNCNA6PVL3 124 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 HAPLN4Q86UW8 402 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 TPSG1Q9NRR2 321 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 MSMBP08118 114 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 HIST1H4AP62805 103 aaKnown RBP11.16□□□□□ -0.62
PRKCB-201ENST00000303531 SLAQ13239 276 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 NLRC5Q86WI3 1866 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 WT1-ASQ06250 92 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 ZNF134P52741 427 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 ZNF114Q8NC26 417 aa11.16□□□□□ -0.62
PRKCB-201ENST00000303531 GTSF1LQ9H1H1 148 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 DEFB130BP0DP73 79 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 DEFB130AP0DP74 79 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 C1orf122Q6ZSJ8 110 aa11.15□□□□□ -0.62
PRKCB-201ENST00000303531 GPR179Q6PRD1 2367 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms