RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF462Q96JM2 2506 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 TRAV8-6A0A0B4J262 113 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 CTRLP40313 264 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 AMN1Q8IY45 258 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 OR1N2Q8NGR9 330 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 ZNF503Q96F45 646 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 D6R8Y8 96 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 GRNP28799 593 aaKnown RBP11.24□□□□□ -0.61
SDC2-201ENST00000302190 SMAGPQ0VAQ4 97 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
SDC2-201ENST00000302190 NBR2O15453 112 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 TMPRSS3P57727 454 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 WFDC12Q8WWY7 111 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 TMEM213A2RRL7 107 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 RPL7P18124 248 aaKnown RBP11.23□□□□□ -0.61
SDC2-201ENST00000302190 PAX2Q02962 417 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 TMEM30BQ3MIR4 351 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 SFTA2Q6UW10 78 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 TMEM160Q9NX00 188 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 RABAC1Q9UI14 185 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 LY96Q9Y6Y9 160 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 PSG9Q00887 426 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 ZC2HC1AQ96GY0 325 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 ZNF414Q96IQ9 312 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 OTORQ9NRC9 128 aa11.23□□□□□ -0.61
SDC2-201ENST00000302190 CHD6Q8TD26 2715 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 M0R381 172 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 LYZL1Q6UWQ5 148 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 VPS13CQ709C8 3753 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 LRRK2Q5S007 2527 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 LHBP01229 141 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 IGHV3-11P01762 117 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 EBLN2Q6P2I7 272 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 C22orf46C9J442 243 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 BUB1B-PAK6H3BSN5 160 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 TMEM78Q5T7P6 136 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 SP5Q6BEB4 398 aaPredicted RBP11.22□□□□□ -0.61
SDC2-201ENST00000302190 ZNF833PQ6ZTB9 187 aa11.22□□□□□ -0.61
SDC2-201ENST00000302190 TMEM75Q8N9X5 138 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 FER1L6-AS1Q8NA97 138 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 C1RLQ9NZP8 487 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 K7ENP7 123 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 IFI27P40305 119 aaPredicted RBP11.21□□□□□ -0.61
SDC2-201ENST00000302190 GATA4P43694 442 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 C8orf49Q96NF6 230 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 GTSF1LQ9H1H1 148 aa11.21□□□□□ -0.61
SDC2-201ENST00000302190 LINC00310P59036 64 aa11.21□□□□□ -0.62
SDC2-201ENST00000302190 TMEM219Q86XT9 240 aa11.21□□□□□ -0.62
SDC2-201ENST00000302190 FAM167A-AS1Q96KT0 104 aa11.21□□□□□ -0.62
SDC2-201ENST00000302190 NAV2Q8IVL1 2488 aa11.21□□□□□ -0.62
SDC2-201ENST00000302190 SMIM27A0A1W2PRY6 76 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 H3BUT2 72 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 EIF4EBP1Q13541 118 aaPredicted RBP11.2□□□□□ -0.62
SDC2-201ENST00000302190 Q8N7P7 452 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 J3QR89 54 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 PF4V1P10720 104 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 RHOGP84095 191 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 NDPQ00604 133 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 CCDC144NLQ6NUI1 221 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 IGF2-ASQ6U949 168 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 ORMDL3Q8N138 153 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 A6NDN8 102 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
SDC2-201ENST00000302190 TMEM155Q4W5P6 130 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 Q8NA96 180 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 TRGV9Q99603 122 aa11.2□□□□□ -0.62
SDC2-201ENST00000302190 TAX1BP3O14907 124 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 FAM71F2Q6NXP2 309 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 SCGB1D4Q6XE38 83 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 SRD5A1P18405 259 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 Q86TA4 180 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 ZNF502Q8TBZ5 544 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 FAM106CPP0CH98 169 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 HLA-DMBP28068 263 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 MAP1LC3AQ9H492 121 aa11.19□□□□□ -0.62
SDC2-201ENST00000302190 SMIM17P0DL12 118 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 NDUFS7O75251 213 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 IGFL2Q6UWQ7 119 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 FOXC2Q99958 501 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 IGHV1-24A0A0C4DH33 117 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 SPRY2O43597 315 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 CEACAM4O75871 244 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 ESDP10768 282 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 ERCC8Q13216 396 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 GUSBP1Q15486 140 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 TMEM97Q5BJF2 176 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 PRSS57Q6UWY2 283 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 LINC00322Q6ZN03 302 aaPredicted RBP11.18□□□□□ -0.62
SDC2-201ENST00000302190 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 MYOZ3Q8TDC0 251 aa11.18□□□□□ -0.62
SDC2-201ENST00000302190 CHODLQ9H9P2 273 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms