RNA–Protein interactions for RNA: ENST00000298454.3

VSTM4-201, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VSTM4, Length 2,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-201ENST00000298454 ZC2HC1AQ96GY0 325 aa17.44■□□□□ 0.38
VSTM4-201ENST00000298454 NPFFR1Q9GZQ6 430 aa17.44■□□□□ 0.38
VSTM4-201ENST00000298454 ZFP30Q9Y2G7 519 aa17.44■□□□□ 0.38
VSTM4-201ENST00000298454 P01737 135 aa17.43■□□□□ 0.38
VSTM4-201ENST00000298454 RNF182Q8N6D2 247 aa17.43■□□□□ 0.38
VSTM4-201ENST00000298454 RPP21Q9H633 154 aaKnown RBP17.43■□□□□ 0.38
VSTM4-201ENST00000298454 MRPL54Q6P161 138 aaKnown RBP17.42■□□□□ 0.38
VSTM4-201ENST00000298454 C16orf54Q6UWD8 224 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 TSKUQ8WUA8 353 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 DAZAP1Q96EP5 407 aaKnown RBP17.42■□□□□ 0.38
VSTM4-201ENST00000298454 FOXC2Q99958 501 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 SERTM2A0A1B0GWG4 89 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 IZUMO1RA6ND01 250 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 FAM209BQ5JX69 171 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 LCN12Q6JVE5 192 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 GBGT1Q8N5D6 347 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 NEU1Q99519 415 aa17.42■□□□□ 0.38
VSTM4-201ENST00000298454 PEF1Q9UBV8 284 aaKnown RBP17.42■□□□□ 0.38
VSTM4-201ENST00000298454 GCN1Q92616 2671 aaKnown RBP17.41■□□□□ 0.38
VSTM4-201ENST00000298454 ITPR2Q14571 2701 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 IFITM10A6NMD0 228 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 CDX1P47902 265 aaPredicted RBP17.41■□□□□ 0.38
VSTM4-201ENST00000298454 ARL6IP6Q8N6S5 226 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 NUP35Q8NFH5 326 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 GLMPQ8WWB7 406 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 C8orf49Q96NF6 230 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 UNC79Q9P2D8 2635 aa17.41■□□□□ 0.38
VSTM4-201ENST00000298454 SNURFLB1AK76 121 aa17.4■□□□□ 0.38
VSTM4-201ENST00000298454 RPLP1P05386 114 aaKnown RBP17.4■□□□□ 0.38
VSTM4-201ENST00000298454 PDZD11Q5EBL8 140 aa17.4■□□□□ 0.38
VSTM4-201ENST00000298454 VGLL1Q99990 258 aa17.4■□□□□ 0.38
VSTM4-201ENST00000298454 FLNAP21333 2647 aaKnown RBP17.4■□□□□ 0.38
VSTM4-201ENST00000298454 HIGD1CA8MV81 97 aa17.4■□□□□ 0.38
VSTM4-201ENST00000298454 SLC50A1Q9BRV3 221 aa17.4■□□□□ 0.38
VSTM4-201ENST00000298454 MRPL18Q9H0U6 180 aaKnown RBP17.4■□□□□ 0.38
VSTM4-201ENST00000298454 TLN2Q9Y4G6 2542 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 TRAV8-2A0A0B4J237 113 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 TMEM89A2RUT3 159 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 CRIP1P50238 77 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 KRTAP1-1Q07627 177 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 C8orf86Q6ZUL3 223 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 TCF24Q7RTU0 167 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 NAT8BQ9UHF3 227 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 XKRY2A2RUG3 117 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 PRAC2D3DTV9 90 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 NPIPB6E9PJ23 425 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 GNB1LQ9BYB4 327 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 AKAP9Q99996 3911 aa17.39■□□□□ 0.37
VSTM4-201ENST00000298454 LINC00518Q8N0U6 118 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 HIST3H2BBQ8N257 126 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 Q8TAT8 98 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 RPL19P84098 196 aaKnown RBP17.38■□□□□ 0.37
VSTM4-201ENST00000298454 TM4SF20Q53R12 229 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 CT83Q5H943 113 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 GTSF1Q8WW33 167 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 GPR61Q9BZJ8 451 aa17.38■□□□□ 0.37
VSTM4-201ENST00000298454 TMEM136Q6ZRR5 245 aa17.37■□□□□ 0.37
VSTM4-201ENST00000298454 A8MWL6 223 aa17.36■□□□□ 0.37
VSTM4-201ENST00000298454 GZMBP10144 247 aa17.36■□□□□ 0.37
VSTM4-201ENST00000298454 ERCC8Q13216 396 aa17.36■□□□□ 0.37
VSTM4-201ENST00000298454 TEX29Q8N6K0 151 aa17.36■□□□□ 0.37
VSTM4-201ENST00000298454 OR2D3Q8NGH3 330 aa17.36■□□□□ 0.37
VSTM4-201ENST00000298454 PRR25Q96S07 402 aa17.36■□□□□ 0.37
VSTM4-201ENST00000298454 EDN2P20800 178 aa17.35■□□□□ 0.37
VSTM4-201ENST00000298454 MEOX2P50222 304 aa17.35■□□□□ 0.37
VSTM4-201ENST00000298454 RAB4BP61018 213 aa17.35■□□□□ 0.37
VSTM4-201ENST00000298454 FOXE3Q13461 319 aa17.35■□□□□ 0.37
VSTM4-201ENST00000298454 WDR73Q6P4I2 378 aa17.35■□□□□ 0.37
VSTM4-201ENST00000298454 DAZ1Q9NQZ3 744 aaKnown RBP17.35■□□□□ 0.37
VSTM4-201ENST00000298454 ELANEP08246 267 aa17.34■□□□□ 0.37
VSTM4-201ENST00000298454 GPHB5Q86YW7 130 aa17.34■□□□□ 0.37
VSTM4-201ENST00000298454 Q8N2B8 174 aa17.34■□□□□ 0.37
VSTM4-201ENST00000298454 OR4B1Q8NGF8 309 aa17.34■□□□□ 0.37
VSTM4-201ENST00000298454 SELENOKQ9Y6D0 94 aa17.34■□□□□ 0.37
VSTM4-201ENST00000298454 IGHV7-4-1A0A0J9YVY3 117 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 A0A1W2PS18 150 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 CT45A10P0DMU9 189 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 COA6Q5JTJ3 125 aaKnown RBP17.33■□□□□ 0.37
VSTM4-201ENST00000298454 SAPCD1Q5SSQ6 148 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 C16orf92Q96LL3 132 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 RHPN1-AS1Q9BWJ2 59 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 YAE1D1Q9NRH1 226 aa17.33■□□□□ 0.37
VSTM4-201ENST00000298454 CD5LO43866 347 aa17.33■□□□□ 0.36
VSTM4-201ENST00000298454 FAM106AQ4KMX7 169 aa17.33■□□□□ 0.36
VSTM4-201ENST00000298454 MYOZ3Q8TDC0 251 aa17.33■□□□□ 0.36
VSTM4-201ENST00000298454 PGLYRP4Q96LB8 373 aa17.33■□□□□ 0.36
VSTM4-201ENST00000298454 SONP18583 2426 aaKnown RBP17.32■□□□□ 0.36
VSTM4-201ENST00000298454 FBLL1A6NHQ2 334 aaKnown RBP17.32■□□□□ 0.36
VSTM4-201ENST00000298454 MT-ND6P03923 174 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 S100A8P05109 93 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 GFRA4Q9GZZ7 299 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 A0A1B0GUS0 222 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 GRIFINA4D1Z8 144 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 COX19Q49B96 90 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 GDF5OSQ5U4N7 250 aa17.32■□□□□ 0.36
VSTM4-201ENST00000298454 COX8CQ7Z4L0 72 aa17.31■□□□□ 0.36
VSTM4-201ENST00000298454 TMEM86BQ8N661 226 aa17.31■□□□□ 0.36
VSTM4-201ENST00000298454 WIPF2Q8TF74 440 aaPredicted RBP17.31■□□□□ 0.36
VSTM4-201ENST00000298454 RBAKDNA6NC62 111 aa17.3■□□□□ 0.36
VSTM4-201ENST00000298454 RPL11P62913 178 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms