RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 ATP5G2Q06055 141 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 TWIST1Q15672 202 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 Q6ZWC4 215 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 RNF5Q99942 180 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 TRAV30A0A087WSZ9 112 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 TMEM189A5PLL7 270 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 G0S2P27469 103 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 HBBP68871 147 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 ZC2HC1AQ96GY0 325 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 FMC1Q96HJ9 113 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 C16orf92Q96LL3 132 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 GNB1LQ9BYB4 327 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 NACAE9PAV3 2078 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 CTSGP08311 255 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 ARMS2P0C7Q2 107 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 C14orf144Q96I85 54 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 VGLL1Q99990 258 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 SIRPDQ9H106 197 aa7.28□□□□□ -1.24
PRDM9-201ENST00000296682 TOMM40O96008 361 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 APOHP02749 345 aaPredicted RBP7.27□□□□□ -1.25
PRDM9-201ENST00000296682 MT-ND6P03923 174 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 HTN1P15515 57 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 YPEL3P61236 119 aaPredicted RBP7.27□□□□□ -1.25
PRDM9-201ENST00000296682 MINOS1Q5TGZ0 78 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 Q86TA4 180 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 MINOS1-NBL1R4GNA1 71 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 HECTD1Q9ULT8 2610 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 GDF5OSQ5U4N7 250 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 NDFIP1Q9BT67 221 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 UFC1Q9Y3C8 167 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 CELSR2Q9HCU4 2923 aa7.27□□□□□ -1.25
PRDM9-201ENST00000296682 IGLV11-55A0A075B6I3 123 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
PRDM9-201ENST00000296682 SMKR1H3BMG3 65 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 MYCNOSP40205 109 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 C11orf44Q8N8P7 122 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 GTSF1Q8WW33 167 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 TRAV41A0A0B4J266 112 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 A0A1W2PS18 150 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 TMEM213A2RRL7 107 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 SMAD7O15105 426 aaKnown RBP7.26□□□□□ -1.25
PRDM9-201ENST00000296682 HIST2H2BCQ6DN03 193 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 ZNF414Q96IQ9 312 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 METTL26Q96S19 204 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 MRPL27Q9P0M9 148 aaKnown RBP7.26□□□□□ -1.25
PRDM9-201ENST00000296682 TP53TG3Q9ULZ0 132 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 VWC2LB2RUY7 222 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 RNF223E7ERA6 249 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 NCR2O95944 276 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 COX6B1P14854 86 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 RBPMS2Q6ZRY4 209 aaKnown RBP7.26□□□□□ -1.25
PRDM9-201ENST00000296682 NIT1Q86X76 327 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 EEF1AKMT3Q96AZ1 226 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 CSMD2Q7Z408 3487 aa7.26□□□□□ -1.25
PRDM9-201ENST00000296682 SMIM27A0A1W2PRY6 76 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 ODF3BA8MYP8 253 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 SNAI2O43623 268 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 TRBV12-3P01733 135 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 ARL3P36405 182 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 PAFAH1B2P68402 229 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 MAJINQ3KP22 176 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 Q6ZS46 218 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 NPBQ8NG41 125 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 KLK15Q9H2R5 256 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 A0A1B0GUT8 65 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 PRAC2D3DTV9 90 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 H3BRN7 92 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 GPX1P07203 203 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 FA2HQ7L5A8 372 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 ZNF738Q8NE65 137 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 OR8A1Q8NGG7 326 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 C18orf32Q8TCD1 76 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 IGHV1-69DA0A0B4J2H0 117 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 IGHV1-69P01742 117 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 PLP1P60201 277 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 PSG3Q16557 428 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 LYZL1Q6UWQ5 148 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 SIGLEC15Q6ZMC9 328 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 SRSF8Q9BRL6 282 aaKnown RBP7.25□□□□□ -1.25
PRDM9-201ENST00000296682 PPP1R14DQ9NXH3 145 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 RNF24Q9Y225 148 aa7.25□□□□□ -1.25
PRDM9-201ENST00000296682 ZNF324O75467 553 aaPredicted RBP7.24□□□□□ -1.25
PRDM9-201ENST00000296682 NDUFA3O95167 84 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 S100A4P26447 101 aaKnown RBP7.24□□□□□ -1.25
PRDM9-201ENST00000296682 POLR3KQ9Y2Y1 108 aaPredicted RBP7.24□□□□□ -1.25
PRDM9-201ENST00000296682 RNF114Q9Y508 228 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 RIGQ13278 110 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 SMIM12Q96EX1 92 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 SPATA45Q537H7 98 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 IL17RELQ6ZVW7 336 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 AMN1Q8IY45 258 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 TTC9CQ8N5M4 171 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 C18orf15Q96N68 181 aa7.24□□□□□ -1.25
PRDM9-201ENST00000296682 TEX15Q9BXT5 2789 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 TRBV9A0A0B4J1U6 114 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 SH2D1AO60880 128 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 MSMBP08118 114 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 Q6ZN92 141 aa7.23□□□□□ -1.25
PRDM9-201ENST00000296682 KCNS1Q96KK3 526 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms