RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 GFRALQ6UXV0 394 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 ADGRG4Q8IZF6 3080 aa11.61□□□□□ -0.55
CCNF-201ENST00000293968 NPYP01303 97 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 PLP1P60201 277 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 FAM104BQ5XKR9 115 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 FER1L6-AS1Q8NA97 138 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 SMAD7O15105 426 aaKnown RBP11.6□□□□□ -0.55
CCNF-201ENST00000293968 PPBPP02775 128 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 FCER1GP30273 86 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 ZNF491Q8N8L2 437 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 JMJD8Q96S16 334 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 A0A1B0GW15 77 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 ZNF785A8K8V0 405 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 C3orf36Q3SXR2 165 aa11.6□□□□□ -0.55
CCNF-201ENST00000293968 LAMA5O15230 3695 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 IGHV3OR16-13A0A075B7E8 117 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 IGHV3-74A0A0B4J1X5 117 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 C9orf118A6NHY6 69 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 Q6AWC8 147 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 SPTBN1Q01082 2364 aaKnown RBP11.59□□□□□ -0.55
CCNF-201ENST00000293968 H3BRN7 92 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 DLX6P56179 175 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 SPENQ96T58 3664 aaKnown RBP11.59□□□□□ -0.55
CCNF-201ENST00000293968 K7EIM0 57 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 K7EMI3 77 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 THBDP07204 575 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 HSD52Q0P140 79 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
CCNF-201ENST00000293968 OTOGLQ3ZCN5 2332 aa11.58□□□□□ -0.56
CCNF-201ENST00000293968 LY6HO94772 140 aa11.58□□□□□ -0.56
CCNF-201ENST00000293968 HLA-DMBP28068 263 aa11.58□□□□□ -0.56
CCNF-201ENST00000293968 LEPP41159 167 aa11.58□□□□□ -0.56
CCNF-201ENST00000293968 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.56
CCNF-201ENST00000293968 FABP2P12104 132 aa11.58□□□□□ -0.56
CCNF-201ENST00000293968 E7EQL1 145 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 Q6ZS92 163 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 ZFHX2Q9C0A1 2572 aaPredicted RBP11.57□□□□□ -0.56
CCNF-201ENST00000293968 PVRIGQ6DKI7 326 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 COL25A1Q9BXS0 654 aaPredicted RBP11.57□□□□□ -0.56
CCNF-201ENST00000293968 A0A096LNJ9 63 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 H3BRM9 83 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 KLRD1Q13241 179 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 S100A7AQ86SG5 101 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 CSTL1Q9H114 145 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 MAP1LC3AQ9H492 121 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 JKAMPQ9P055 326 aa11.57□□□□□ -0.56
CCNF-201ENST00000293968 APOBEC3AP31941 199 aaPredicted RBP11.57□□□□□ -0.56
CCNF-201ENST00000293968 K7ERJ3 54 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 EGR2P11161 476 aaPredicted RBP11.56□□□□□ -0.56
CCNF-201ENST00000293968 MFAP4P55083 255 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 LGALS9BQ3B8N2 356 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 LGALS9CQ6DKI2 356 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 GTSCR1Q86UQ5 136 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 VGLL1Q99990 258 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 NDUFS7O75251 213 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 C8orf31Q8N9H6 132 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 FOXC2Q99958 501 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 UFC1Q9Y3C8 167 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 CRYGBP07316 175 aa11.56□□□□□ -0.56
CCNF-201ENST00000293968 ARHGAP32A7KAX9 2087 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 K7EP34 96 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 GATA1P15976 413 aaPredicted RBP11.55□□□□□ -0.56
CCNF-201ENST00000293968 TMEM160Q9NX00 188 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 NBR2O15453 112 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 IGLV1-47P01700 117 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 SMIM13P0DJ93 91 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 FGF6P10767 208 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 RPS20P60866 119 aaKnown RBP11.55□□□□□ -0.56
CCNF-201ENST00000293968 BOD1L2Q8IYS8 172 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 OR9G4Q8NGQ1 327 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 OR1N2Q8NGR9 330 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 LINC01560Q8TB33 94 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 ERCC8Q13216 396 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 OR4X2Q8NGF9 303 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 TACC2O95359 2948 aa11.55□□□□□ -0.56
CCNF-201ENST00000293968 SAMD5Q5TGI4 173 aa11.54□□□□□ -0.56
CCNF-201ENST00000293968 NHP2Q9NX24 153 aaKnown RBP11.54□□□□□ -0.56
CCNF-201ENST00000293968 C21orf62Q9NYP8 219 aa11.54□□□□□ -0.56
CCNF-201ENST00000293968 J3KRW8 73 aa11.54□□□□□ -0.56
CCNF-201ENST00000293968 GAS8-AS1O95177 125 aa11.54□□□□□ -0.56
CCNF-201ENST00000293968 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
CCNF-201ENST00000293968 CD3EP07766 207 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 RPL7P18124 248 aaKnown RBP11.53□□□□□ -0.56
CCNF-201ENST00000293968 BMI1P35226 326 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 PRR25Q96S07 402 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 PIP4P2Q8N4L2 257 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 TNFRSF14Q92956 283 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 KALRNO60229 2985 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 ZNF80P51504 273 aaPredicted RBP11.53□□□□□ -0.56
CCNF-201ENST00000293968 PAX2Q02962 417 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 RAB1BQ9H0U4 201 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 KAAG1Q9UBP8 84 aa11.53□□□□□ -0.56
CCNF-201ENST00000293968 A0A1W2PPM0 123 aa11.52□□□□□ -0.56
CCNF-201ENST00000293968 FAM90A27PA6NNH2 459 aa11.52□□□□□ -0.56
CCNF-201ENST00000293968 CEACAM4O75871 244 aa11.52□□□□□ -0.56
CCNF-201ENST00000293968 ANKRD11Q6UB99 2663 aaPredicted RBP11.52□□□□□ -0.57
CCNF-201ENST00000293968 C16orf54Q6UWD8 224 aa11.52□□□□□ -0.57
CCNF-201ENST00000293968 DPM3Q9P2X0 92 aa11.52□□□□□ -0.57
CCNF-201ENST00000293968 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms