RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 OPCMLQ14982 345 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 TTC32Q5I0X7 151 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 GFI1BQ5VTD9 330 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 SSX7Q7RTT5 188 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 NRARPQ7Z6K4 114 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 UQCC1Q9NVA1 299 aa9.84□□□□□ -0.83
TPM1-202ENST00000288398 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 GAGE12BA1L429 117 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 SLC17A3O00476 420 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 GAGE7O76087 117 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 CST7O76096 145 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 BTCP35070 178 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 S100A10P60903 97 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 HBG1P69891 147 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 HBG2P69892 147 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 BAXQ07812 192 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 STX12Q86Y82 276 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 TMEM37Q8WXS4 190 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 PARD6GQ9BYG4 376 aaPredicted RBP9.83□□□□□ -0.84
TPM1-202ENST00000288398 LINC00588Q9Y4M8 146 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 DNAH17Q9UFH2 4485 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
TPM1-202ENST00000288398 TRAV12-3A0A0B4J271 114 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 A0A0J9YY99 117 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 UBE2L5PA0A1B0GUS4 154 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 LYRM1O43325 122 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 IGLC2P0DOY2 106 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 TNP2Q05952 138 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 MIC13Q5XKP0 118 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 ODF3Q96PU9 254 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 PYGO2Q9BRQ0 406 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 TIMM9Q9Y5J7 89 aa9.82□□□□□ -0.84
TPM1-202ENST00000288398 TRGV2A0A075B6R0 118 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 TRAV6A0A075B6T7 132 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 PRAC2D3DTV9 90 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 S100A11P31949 105 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 RXFP4Q8TDU9 374 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 ZNF431Q8TF32 576 aaPredicted RBP9.81□□□□□ -0.84
TPM1-202ENST00000288398 ZNF503Q96F45 646 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 Q9H8V8 135 aa9.81□□□□□ -0.84
TPM1-202ENST00000288398 FAM24AA6NFZ4 105 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 H3BQ15 152 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 TCRBP04435 133 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 SULT1A1P50225 295 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 KIR3DS1Q14943 382 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 MORN5Q5VZ52 161 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 ZNF680Q8NEM1 530 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 C2orf50Q96LR7 162 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 SDHCQ99643 169 aaPredicted RBP9.8□□□□□ -0.84
TPM1-202ENST00000288398 AAMDCQ9H7C9 122 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 SLC39A9Q9NUM3 307 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 NUDT15Q9NV35 164 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 PTTG2Q9NZH5 202 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 WDR83OSQ9Y284 106 aa9.8□□□□□ -0.84
TPM1-202ENST00000288398 TRAV5A0A0B4J249 113 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 ZNF253O75346 499 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 SLC25A5P05141 298 aaKnown RBP9.79□□□□□ -0.84
TPM1-202ENST00000288398 CT45A10P0DMU9 189 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 FGF7P21781 194 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 RPL29P47914 159 aaKnown RBP9.79□□□□□ -0.84
TPM1-202ENST00000288398 LINC00299Q6ZSB3 139 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 MRPL53Q96EL3 112 aaKnown RBP9.79□□□□□ -0.84
TPM1-202ENST00000288398 SAT2Q96F10 170 aaPredicted RBP9.79□□□□□ -0.84
TPM1-202ENST00000288398 SEC22CQ9BRL7 303 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 LYRM2Q9NU23 88 aaPredicted RBP9.79□□□□□ -0.84
TPM1-202ENST00000288398 PRELID1Q9Y255 219 aa9.79□□□□□ -0.84
TPM1-202ENST00000288398 C7orf71A4D174 169 aa9.78□□□□□ -0.84
TPM1-202ENST00000288398 H3BNG1 76 aa9.78□□□□□ -0.84
TPM1-202ENST00000288398 HIST1H1EP10412 219 aaKnown RBP9.78□□□□□ -0.84
TPM1-202ENST00000288398 ATP6V1FQ16864 119 aa9.78□□□□□ -0.84
TPM1-202ENST00000288398 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
TPM1-202ENST00000288398 GPN1Q9HCN4 374 aaPredicted RBP9.78□□□□□ -0.84
TPM1-202ENST00000288398 ZNF586Q9NXT0 402 aa9.78□□□□□ -0.84
TPM1-202ENST00000288398 PKD1P98161 4303 aa9.78□□□□□ -0.84
TPM1-202ENST00000288398 TRBV19A0A075B6N1 114 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 MPDU1O75352 247 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 H2AFB2P0C5Z0 115 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 DAZ2Q13117 558 aaKnown RBP9.77□□□□□ -0.85
TPM1-202ENST00000288398 BLNKQ8WV28 456 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 TMPRSS5Q9H3S3 457 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 TMEM14CQ9P0S9 112 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 DNAH11Q96DT5 4516 aa9.77□□□□□ -0.85
TPM1-202ENST00000288398 TRGV1A0A0A0MS02 117 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 FAM240BA0A1B0GVZ2 78 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 PLA2G10O15496 165 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 GPX1P07203 203 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 HOXA5P20719 270 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
TPM1-202ENST00000288398 ERCC8Q13216 396 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 RAB32Q13637 225 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 PDE6HQ13956 83 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 VWC2Q2TAL6 325 aa9.76□□□□□ -0.85
TPM1-202ENST00000288398 TMEM78Q5T7P6 136 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms