RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 TRAV12-2A0A075B6T6 113 aa18.13■□□□□ 0.49
PDF-201ENST00000288022 NDUFB4O95168 129 aa18.13■□□□□ 0.49
PDF-201ENST00000288022 NBEAP1P0C6P0 100 aa18.13■□□□□ 0.49
PDF-201ENST00000288022 AAMDCQ9H7C9 122 aa18.13■□□□□ 0.49
PDF-201ENST00000288022 HBE1P02100 147 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 TAS2R45P59539 299 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 KHDC3LQ587J8 217 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 EXOC3-AS1Q8N2X6 119 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 RNF141Q8WVD5 230 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 TNFSF18Q9UNG2 199 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 PRELID1Q9Y255 219 aa18.12■□□□□ 0.49
PDF-201ENST00000288022 KLK5Q9Y337 293 aaPredicted RBP18.12■□□□□ 0.49
PDF-201ENST00000288022 M0R3E3 92 aa18.11■□□□□ 0.49
PDF-201ENST00000288022 CRXO43186 299 aaPredicted RBP18.11■□□□□ 0.49
PDF-201ENST00000288022 EMP1P54849 157 aa18.11■□□□□ 0.49
PDF-201ENST00000288022 FXYD5Q96DB9 178 aa18.11■□□□□ 0.49
PDF-201ENST00000288022 MRPL53Q96EL3 112 aaKnown RBP18.11■□□□□ 0.49
PDF-201ENST00000288022 CSMD3Q7Z407 3707 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 A0A1W2PPV4 95 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 RNF222A6NCQ9 220 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 M6PRP20645 277 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 RAB2AP61019 212 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 UBE2L3P68036 154 aaKnown RBP18.1■□□□□ 0.49
PDF-201ENST00000288022 ICAM4Q14773 271 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 STARD9Q9P2P6 4700 aa18.1■□□□□ 0.49
PDF-201ENST00000288022 KMT2CQ8NEZ4 4911 aaKnown RBP18.1■□□□□ 0.49
PDF-201ENST00000288022 LCE6AA0A183 80 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 TMEM189A5PLL7 270 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 EIF3GO75821 320 aaKnown RBP eCLIP18.09■□□□□ 0.49
PDF-201ENST00000288022 JTBO76095 146 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 CDKN1BP46527 198 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 RRN3P1Q2M238 152 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 FAM122CQ6P4D5 195 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 CELA1Q9UNI1 258 aa18.09■□□□□ 0.49
PDF-201ENST00000288022 ATP6V0CP27449 155 aa18.08■□□□□ 0.48
PDF-201ENST00000288022 TSPOP30536 169 aa18.08■□□□□ 0.48
PDF-201ENST00000288022 RPP25LQ8N5L8 163 aaKnown RBP18.08■□□□□ 0.48
PDF-201ENST00000288022 OR10G4Q8NGN3 311 aa18.08■□□□□ 0.48
PDF-201ENST00000288022 OR10G9Q8NGN4 311 aa18.08■□□□□ 0.48
PDF-201ENST00000288022 OR10G7Q8NGN6 311 aa18.08■□□□□ 0.48
PDF-201ENST00000288022 ZNF503Q96F45 646 aa18.08■□□□□ 0.48
PDF-201ENST00000288022 BORCS7-ASMTA0A0B4J1R7 106 aa18.07■□□□□ 0.48
PDF-201ENST00000288022 LOC102723971A0A1B0GUV8 181 aa18.07■□□□□ 0.48
PDF-201ENST00000288022 NPIPB6E9PJ23 425 aa18.07■□□□□ 0.48
PDF-201ENST00000288022 G3V3Q6 166 aa18.07■□□□□ 0.48
PDF-201ENST00000288022 ARPC5O15511 151 aa18.07■□□□□ 0.48
PDF-201ENST00000288022 PHYHIPLQ96FC7 376 aa18.07■□□□□ 0.48
PDF-201ENST00000288022 PSMG3Q9BT73 122 aaPredicted RBP18.07■□□□□ 0.48
PDF-201ENST00000288022 SMLR1H3BR10 107 aa18.06■□□□□ 0.48
PDF-201ENST00000288022 RPL7L1Q6DKI1 246 aaKnown RBP18.06■□□□□ 0.48
PDF-201ENST00000288022 OR2G3Q8NGZ4 309 aa18.06■□□□□ 0.48
PDF-201ENST00000288022 LINC01587Q99440 93 aa18.06■□□□□ 0.48
PDF-201ENST00000288022 ZNF705GA8MUZ8 300 aaPredicted RBP18.05■□□□□ 0.48
PDF-201ENST00000288022 RANP62826 216 aaKnown RBP18.05■□□□□ 0.48
PDF-201ENST00000288022 ERCC8Q13216 396 aa18.05■□□□□ 0.48
PDF-201ENST00000288022 ZNF767PQ75MW2 155 aa18.05■□□□□ 0.48
PDF-201ENST00000288022 TENM2Q9NT68 2774 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 C11orf94C9JXX5 98 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 J3KRW8 73 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 SPART-AS1P0CW21 52 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 CT45A10P0DMU9 189 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 LEPP41159 167 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 Q6ZTC4 211 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 TMEM256Q8N2U0 113 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 SH3BGRL3Q9H299 93 aa18.04■□□□□ 0.48
PDF-201ENST00000288022 HMGB3O15347 200 aaKnown RBP18.03■□□□□ 0.48
PDF-201ENST00000288022 CDC34P49427 236 aaPredicted RBP18.03■□□□□ 0.48
PDF-201ENST00000288022 PQLC2Q6ZP29 291 aa18.03■□□□□ 0.48
PDF-201ENST00000288022 IGKV2-40A0A087WW87 121 aaPredicted RBP18.02■□□□□ 0.48
PDF-201ENST00000288022 IGKV2D-40P01614 121 aaPredicted RBP18.02■□□□□ 0.48
PDF-201ENST00000288022 MBP02144 154 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 PRM2P04554 102 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 HTN1P15515 57 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 SERF2P84101 59 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 KIR3DS1Q14943 382 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 C12orf74Q32Q52 190 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 LYPD1Q8N2G4 141 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 C2CD4CQ8TF44 421 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 GNPNAT1Q96EK6 184 aaPredicted RBP18.02■□□□□ 0.48
PDF-201ENST00000288022 ODF3Q96PU9 254 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 Q9H3A6 140 aa18.02■□□□□ 0.48
PDF-201ENST00000288022 YTHDF2Q9Y5A9 579 aaKnown RBP18.02■□□□□ 0.48
PDF-201ENST00000288022 TRAV10A0A0B4J240 114 aa18.01■□□□□ 0.47
PDF-201ENST00000288022 CSN1S1P47710 185 aa18.01■□□□□ 0.47
PDF-201ENST00000288022 FAM222AQ5U5X8 452 aa18.01■□□□□ 0.47
PDF-201ENST00000288022 GFI1BQ5VTD9 330 aa18.01■□□□□ 0.47
PDF-201ENST00000288022 LINC00477Q96M19 166 aa18.01■□□□□ 0.47
PDF-201ENST00000288022 AGPAT4-IT1Q9H0P7 198 aa18.01■□□□□ 0.47
PDF-201ENST00000288022 TEX48A0A1B0GUV7 120 aa18■□□□□ 0.47
PDF-201ENST00000288022 TMEM78Q5T7P6 136 aa18■□□□□ 0.47
PDF-201ENST00000288022 DKK2Q9UBU2 259 aa18■□□□□ 0.47
PDF-201ENST00000288022 TAAR5O14804 337 aa17.99■□□□□ 0.47
PDF-201ENST00000288022 TAS2R60P59551 318 aa17.99■□□□□ 0.47
PDF-201ENST00000288022 C20orf144Q9BQM9 153 aa17.99■□□□□ 0.47
PDF-201ENST00000288022 H7BYZ3 331 aa17.98■□□□□ 0.47
PDF-201ENST00000288022 ARL14EPLP0DKL9 152 aa17.98■□□□□ 0.47
PDF-201ENST00000288022 C9orf47Q6ZRZ4 202 aa17.98■□□□□ 0.47
PDF-201ENST00000288022 RAB24Q969Q5 203 aa17.98■□□□□ 0.47
PDF-201ENST00000288022 HYLS1Q96M11 299 aa17.98■□□□□ 0.47
PDF-201ENST00000288022 VGLL1Q99990 258 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms