RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TMEM241Q24JQ0 296 aa14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 CD300EQ496F6 205 aaPredicted RBP14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 RBPMS2Q6ZRY4 209 aaKnown RBP14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 GBGT1Q8N5D6 347 aa14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 DCANP1Q8TF63 244 aa14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 HIST1H2BAQ96A08 127 aa14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 MDFIQ99750 246 aa14.23□□□□□ -0.13
PDLIM3-202ENST00000284770 SOCS3O14543 225 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 PAFAH1B2P68402 229 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 SAMD13Q5VXD3 122 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 TMEM61Q8N0U2 210 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 C16orf92Q96LL3 132 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 TRAV8-2A0A0B4J237 113 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 M0R036 132 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 TSPAN4O14817 238 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 PNRC1Q12796 327 aaPredicted RBP14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 IGFL4Q6B9Z1 124 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 WFDC9Q8NEX5 89 aa14.22□□□□□ -0.13
PDLIM3-202ENST00000284770 TRAV25A0A0B4J276 109 aa14.21□□□□□ -0.13
PDLIM3-202ENST00000284770 DNASE2O00115 360 aaPredicted RBP14.21□□□□□ -0.13
PDLIM3-202ENST00000284770 SPATA3Q8NHX4 192 aa14.21□□□□□ -0.13
PDLIM3-202ENST00000284770 ATG101Q9BSB4 218 aa14.21□□□□□ -0.13
PDLIM3-202ENST00000284770 STAB1Q9NY15 2570 aa14.21□□□□□ -0.14
PDLIM3-202ENST00000284770 C9JCJ5 164 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 ISLRO14498 428 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 IGLV1-51P01701 117 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 TCRAP04437 139 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 RPL23P62829 140 aaKnown RBP14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 WFDC3Q8IUB2 231 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 LINC00479Q96M42 142 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 CLEC5AQ9NY25 188 aa14.2□□□□□ -0.14
PDLIM3-202ENST00000284770 C7orf77A4D0Y5 90 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 CD33P20138 364 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 AKR1C3P42330 323 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 TFPI2P48307 235 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 RIPPLY3P57055 190 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 RNF182Q8N6D2 247 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 CMTM2Q8TAZ6 248 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 KLF12Q9Y4X4 402 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 TRAV2A0A0B4J234 112 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 PGPEP1LA6NFU8 196 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 K7EQG2 157 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 M0R3E3 92 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 HLA-DMBP28068 263 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 INSL3P51460 131 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 RHEBQ15382 184 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 OR2K2Q8NGT1 345 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 IGF2BP2-AS1Q96M15 143 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 PRELID1Q9Y255 219 aa14.19□□□□□ -0.14
PDLIM3-202ENST00000284770 ID1P41134 155 aa14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 CNN1P51911 297 aaKnown RBP14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 LINC01551Q86U37 167 aa14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 ARL6IP6Q8N6S5 226 aa14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 SPAG8Q99932 426 aaPredicted RBP14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 MCRIP2Q9BUT9 160 aaKnown RBP14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 RPH3ALQ9UNE2 315 aa14.18□□□□□ -0.14
PDLIM3-202ENST00000284770 IZUMO1RA6ND01 250 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 CSN1S1P47710 185 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 TAS2R60P59551 318 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 ADIRFQ15847 76 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 PSG3Q16557 428 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 TMEM183BQ1AE95 376 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 CENPWQ5EE01 88 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 C9orf66Q5T8R8 295 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 LCN12Q6JVE5 192 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 MRPL53Q96EL3 112 aaKnown RBP14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 LY96Q9Y6Y9 160 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 TRAV34A0A0B4J273 112 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 B4DEV8 164 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 OCC1Q8TAD7 63 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 C20orf173Q96LM9 149 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 RPS10P5Q9NQ39 176 aa14.17□□□□□ -0.14
PDLIM3-202ENST00000284770 VWFP04275 2813 aa14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 ZNF705FA8MVS1 300 aaPredicted RBP14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 DIRC3C9JPN6 131 aa14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 GNG4P50150 75 aa14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 SNRPD3P62318 126 aaKnown RBP14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 GOLT1AQ6ZVE7 132 aa14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 FAM24BQ8N5W8 94 aa14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 AURKAIP1Q9NWT8 199 aaPredicted RBP14.16□□□□□ -0.14
PDLIM3-202ENST00000284770 OR4C46A6NHA9 309 aa14.15□□□□□ -0.14
PDLIM3-202ENST00000284770 IGLV2-8P01709 118 aa14.15□□□□□ -0.14
PDLIM3-202ENST00000284770 FMC1Q96HJ9 113 aa14.15□□□□□ -0.14
PDLIM3-202ENST00000284770 ZNF256Q9Y2P7 627 aaPredicted RBP14.15□□□□□ -0.14
PDLIM3-202ENST00000284770 K7EN84 100 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 IGLV2-11P01706 119 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 S100A9P06702 114 aaKnown RBP14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 BTN1A1Q13410 526 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 A0A087WWC5 75 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 UBE2G1P62253 170 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 ISOC2Q96AB3 205 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 SGK494Q96LW2 274 aa14.14□□□□□ -0.15
PDLIM3-202ENST00000284770 TRAV8-1A0A0A6YYK1 113 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 SERTM2A0A1B0GWG4 89 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 PRAC2D3DTV9 90 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 ZNF688P0C7X2 276 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 PRB4P10163 310 aaPredicted RBP14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 TMEM88Q6PEY1 159 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 CBLN2Q8IUK8 224 aa14.13□□□□□ -0.15
PDLIM3-202ENST00000284770 TMEM75Q8N9X5 138 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms