RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 ZNF738Q8NE65 137 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 RCHY1Q96PM5 261 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 METTL26Q96S19 204 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 KLK15Q9H2R5 256 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 ZFP30Q9Y2G7 519 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1D-17A0A075B6S4 117 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TRAV1-1A0A0B4J248 108 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 ANOS1P23352 680 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 NPPCP23582 126 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TIMP3P35625 211 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 PRCDQ00LT1 54 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 SPSB3Q6PJ21 355 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TMEM136Q6ZRR5 245 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 PPP1R27Q86WC6 154 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 HIST3H2BBQ8N257 126 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 RNASEH2CQ8TDP1 164 aaKnown RBP2.29□□□□□ -2.04
HERC4-201ENST00000277817 RNASE6Q93091 150 aaKnown RBP2.29□□□□□ -2.04
HERC4-201ENST00000277817 RAB37Q96AX2 223 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 GPR82Q96P67 336 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 AGMATQ9BSE5 352 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 GGTLC1Q9BX51 225 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TMEM133Q9H2Q1 129 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 Q9H3A6 140 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TMEM242Q9NWH2 141 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 ZNRD1Q9P1U0 126 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 SLC25A15Q9Y619 301 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TRBV24-1A0A075B6N3 115 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 A6NDN8 102 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 C15orf65H3BRN8 121 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 IGKV3-20P01619 116 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 IGKV3-15P01624 115 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 HLA-DRB1P01911 266 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 SLURP1P55000 103 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 XGP55808 180 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 CX3CL1P78423 397 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 PSG9Q00887 426 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 SLC25A34Q6PIV7 304 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 LINC01551Q86U37 167 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 OR10J6PQ8NGY7 276 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 ZNF502Q8TBZ5 544 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 C18orf15Q96N68 181 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 MGST2Q99735 147 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 PMCHL2Q9BQD1 86 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 TMEM70Q9BUB7 260 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 NRN1Q9NPD7 142 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 SMPXQ9UHP9 88 aa2.29□□□□□ -2.04
HERC4-201ENST00000277817 RPUSD1Q9UJJ7 312 aaKnown RBP2.29□□□□□ -2.04
HERC4-201ENST00000277817 YLPM1P49750 1951 aaKnown RBP2.29□□□□□ -2.04
HERC4-201ENST00000277817 TRBV6-6A0A0A6YYG2 114 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 A0A1B0GW64 132 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 IZUMO1RA6ND01 250 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1-16P04430 117 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 PAX9P55771 341 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TAS2R60P59551 318 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 ATP5G2Q06055 141 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 PYY3Q5JQD4 70 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 C10orf91Q5T1B1 145 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 Q6ZS49 121 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TMEM256Q8N2U0 113 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 C21orf62Q9NYP8 219 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 EPDR1Q9UM22 224 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 PHLDA3Q9Y5J5 127 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 F11RQ9Y624 299 aaKnown RBP2.28□□□□□ -2.04
HERC4-201ENST00000277817 CSPG4Q6UVK1 2322 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 DMXL1Q9Y485 3027 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TCRBV4S1A1TA0A5B7 111 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 C15orf62A8K5M9 175 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 NUDT3O95989 172 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 AMBPP02760 352 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 GPX1P07203 203 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 GPR183P32249 361 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 JOSD1Q15040 202 aaPredicted RBP2.28□□□□□ -2.04
HERC4-201ENST00000277817 KLF17Q5JT82 389 aaPredicted RBP2.28□□□□□ -2.04
HERC4-201ENST00000277817 CLEC19AQ6UXS0 136 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 RPRMLQ8N4K4 120 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 OR10AG1Q8NH19 301 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 Q8TCH9 128 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 LINC00479Q96M42 142 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 RPP21Q9H633 154 aaKnown RBP2.28□□□□□ -2.04
HERC4-201ENST00000277817 ANAPC10Q9UM13 185 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TRBV20OR9-2A0A075B6H5 130 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 C7orf71A4D174 169 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 LY6HO94772 140 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1-39P01597 117 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TRGV3P03979 118 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 IGKV1D-39P04432 117 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 GZMBP10144 247 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 PSMB2P49721 201 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 DLX6P56179 175 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TENM4Q6N022 2769 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 C12orf54Q6X4T0 127 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 Q6ZR03 302 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 WDR86Q86TI4 376 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 TMEM219Q86XT9 240 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 MAP1LC3AQ9H492 121 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 HECTD1Q9ULT8 2610 aa2.28□□□□□ -2.04
HERC4-201ENST00000277817 BPTFQ12830 3046 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms