RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 WIPF3A6NGB9 483 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 PLP1P60201 277 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 WT1-ASQ06250 92 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 PDE6HQ13956 83 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 RCHY1Q96PM5 261 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 MRPS16Q9Y3D3 137 aaKnown RBP9.06□□□□□ -0.96
USP6NL-201ENST00000277575 SHISA9B4DS77 424 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 SH2D1AO60880 128 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 YPEL3P61236 119 aaPredicted RBP9.06□□□□□ -0.96
USP6NL-201ENST00000277575 PRR31Q5SQ13 230 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 CHCHD5Q9BSY4 110 aa9.06□□□□□ -0.96
USP6NL-201ENST00000277575 IGKV3D-20A0A0C4DH25 116 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 C22orf46C9J442 243 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 FAM90A2PQ658T7 463 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 DNAL4O96015 105 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 DIAPH2-AS1Q14236 149 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 TPSG1Q9NRR2 321 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 RNF114Q9Y508 228 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 C2orf16Q68DN1 1984 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 D6R8Y8 96 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 TMEM249Q2WGJ8 235 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 C11orf53Q8IXP5 236 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 NUP35Q8NFH5 326 aa9.05□□□□□ -0.96
USP6NL-201ENST00000277575 CHCHD1Q96BP2 118 aaKnown RBP9.05□□□□□ -0.96
USP6NL-201ENST00000277575 APOMO95445 188 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
USP6NL-201ENST00000277575 FXYD7P58549 80 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 HIST1H2BLQ99880 126 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 TRGV1A0A0A0MS02 117 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 DPM2O94777 84 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
USP6NL-201ENST00000277575 CD28P10747 220 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 DEFB131AP59861 70 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 ZNF876PQ49A33 203 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 RNF166Q96A37 237 aaPredicted RBP9.04□□□□□ -0.96
USP6NL-201ENST00000277575 GSN-AS1Q9NRJ2 163 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 NAV3Q8IVL0 2385 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 CFAP161Q6P656 301 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
USP6NL-201ENST00000277575 RASL11AQ6T310 242 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 SORL1Q92673 2214 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 TRAV9-2A0A087WT02 112 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 ZNF415Q09FC8 603 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 MST1LQ2TV78 715 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 Q86TA4 180 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 C1QTNF4Q9BXJ3 329 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 C14orf178Q8N769 122 aaPredicted RBP9.03□□□□□ -0.96
USP6NL-201ENST00000277575 DPH3P1Q9H4G8 78 aa9.03□□□□□ -0.96
USP6NL-201ENST00000277575 SPENQ96T58 3664 aaKnown RBP9.02□□□□□ -0.97
USP6NL-201ENST00000277575 C9JQL5 133 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 J3QLI3 93 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 RPL36AP83881 106 aaKnown RBP9.02□□□□□ -0.97
USP6NL-201ENST00000277575 RPL36ALQ969Q0 106 aaKnown RBP9.02□□□□□ -0.97
USP6NL-201ENST00000277575 A0A087WX48 190 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 LINC01549A6NIU2 74 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 ERCC8Q13216 396 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 C3orf56Q8N813 242 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 FGF23Q9GZV9 251 aaPredicted RBP9.02□□□□□ -0.97
USP6NL-201ENST00000277575 CEP295Q9C0D2 2601 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 PCDH15Q96QU1 1955 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 UBE2CO00762 179 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 AMBPP02760 352 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 POU2AF1Q16633 256 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
USP6NL-201ENST00000277575 LOC105371267A0A1B0GV96 52 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 INSP01308 110 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 LAGE3Q14657 143 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 DMRTC2Q8IXT2 367 aaPredicted RBP9.01□□□□□ -0.97
USP6NL-201ENST00000277575 C2CD3Q4AC94 2353 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 IGHV3-53P01767 116 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 IGHV2-70P01814 119 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 MALP21145 153 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 RIPPLY3P57055 190 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 PRADC1Q9BSG0 188 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 PLXNB3Q9ULL4 1909 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 ADCYAP1P18509 176 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 C1orf122Q6ZSJ8 110 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 DEFB104AQ8WTQ1 72 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 PRO3102Q9H379 93 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 LAMTOR2Q9Y2Q5 125 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 LOC400499M0QZD8 3231 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 IGHV2-5P01817 119 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 TMEM256Q8N2U0 113 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 RNF182Q8N6D2 247 aa9.01□□□□□ -0.97
USP6NL-201ENST00000277575 CHTOPQ9Y3Y2 248 aaKnown RBP9.01□□□□□ -0.97
USP6NL-201ENST00000277575 TRBV19A0A075B6N1 114 aa9□□□□□ -0.97
USP6NL-201ENST00000277575 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
USP6NL-201ENST00000277575 CD300EQ496F6 205 aaPredicted RBP9□□□□□ -0.97
USP6NL-201ENST00000277575 DTX2Q86UW9 622 aa9□□□□□ -0.97
USP6NL-201ENST00000277575 DOPEY1Q5JWR5 2465 aa9□□□□□ -0.97
USP6NL-201ENST00000277575 AMN1Q8IY45 258 aa9□□□□□ -0.97
USP6NL-201ENST00000277575 OR9G4Q8NGQ1 327 aa9□□□□□ -0.97
USP6NL-201ENST00000277575 VCYO14598 125 aa8.99□□□□□ -0.97
USP6NL-201ENST00000277575 IGKCP01834 107 aa8.99□□□□□ -0.97
USP6NL-201ENST00000277575 SPRNQ5BIV9 151 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms