RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 LRRC75A-AS1Q8N1F1 130 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 RNF125Q96EQ8 232 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 C2CD3Q4AC94 2353 aa10.16□□□□□ -0.78
C9orf3-201ENST00000277198 IGHV1-24A0A0C4DH33 117 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 WI2-2373I1.2A0A1W2PRP0 233 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 H3BTX0 84 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 SYS1-DBNDD2H3BUS1 97 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 M0R1W7 72 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 TIMM23O14925 209 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 LY6HO94772 140 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 IGHV4-39P01824 125 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 PSG3Q16557 428 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 EXOC3-AS1Q8N2X6 119 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 MAPK1IP1LQ8NDC0 245 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 PPP1R14DQ9NXH3 145 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 FBLL1A6NHQ2 334 aaKnown RBP10.15□□□□□ -0.78
C9orf3-201ENST00000277198 NPIPB5A8MRT5 1133 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 SMAD7O15105 426 aaKnown RBP10.15□□□□□ -0.78
C9orf3-201ENST00000277198 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
C9orf3-201ENST00000277198 IGLL1P15814 213 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 PET117Q6UWS5 81 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 ORAOV1Q8WV07 137 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 HSPB8Q9UJY1 196 aa10.15□□□□□ -0.78
C9orf3-201ENST00000277198 SH2D7A6NKC9 451 aaPredicted RBP10.14□□□□□ -0.79
C9orf3-201ENST00000277198 HLA-DRB1P01911 266 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 ATOH7Q8N100 152 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 CFHR4Q92496 578 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 TIMD4Q96H15 378 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 ZNF414Q96IQ9 312 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 ONECUT1Q9UBC0 465 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 PSG8Q9UQ74 426 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 OR4C46A6NHA9 309 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 ZNF785A8K8V0 405 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 LYNX1G3V0Z9 82 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 LYNX1P0DP58 116 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 DLX1P56177 255 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 STPG4Q8N801 248 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 MAP1LC3CQ9BXW4 147 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 TMEM191AQ9H0A3 160 aa10.14□□□□□ -0.79
C9orf3-201ENST00000277198 ARFGEF3Q5TH69 2177 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 SCGB2A1O75556 95 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 IL4P05112 153 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 NPSP0C0P6 89 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 MFAP4P55083 255 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 ZNF562Q6V9R5 426 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 C1orf122Q6ZSJ8 110 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 COX8CQ7Z4L0 72 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 ZC2HC1AQ96GY0 325 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 AAMDCQ9H7C9 122 aa10.13□□□□□ -0.79
C9orf3-201ENST00000277198 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
C9orf3-201ENST00000277198 FN1P02751 2386 aaKnown RBP10.12□□□□□ -0.79
C9orf3-201ENST00000277198 IGLV11-55A0A075B6I3 123 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 ODF3BA8MYP8 253 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 OOSP1A8MZH6 123 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 PRTN3P24158 256 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 S100A7P31151 101 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 PSG9Q00887 426 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 C5orf64Q2M2E5 130 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 MAJINQ3KP22 176 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 LDLRAD2Q5SZI1 272 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 CCDC144NLQ6NUI1 221 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 ZNF493Q6ZR52 646 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 SPATA12Q7Z6I5 190 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 CLEC5AQ9NY25 188 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 THYN1Q9P016 225 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 HSBP1L1C9JCN9 74 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 GNG7O60262 68 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 CT45A10P0DMU9 189 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 CSN1S1P47710 185 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 PRSS57Q6UWY2 283 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 TTC9CQ8N5M4 171 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 KIR3DL3Q8N743 410 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 MS4A6AQ9H2W1 248 aa10.12□□□□□ -0.79
C9orf3-201ENST00000277198 NDUFB8O95169 186 aa10.11□□□□□ -0.79
C9orf3-201ENST00000277198 FCGR2BP31994 310 aaPredicted RBP10.11□□□□□ -0.79
C9orf3-201ENST00000277198 TFPI2P48307 235 aa10.11□□□□□ -0.79
C9orf3-201ENST00000277198 NEU4Q8WWR8 484 aaPredicted RBP10.11□□□□□ -0.79
C9orf3-201ENST00000277198 MALRD1Q5VYJ5 2156 aa10.11□□□□□ -0.79
C9orf3-201ENST00000277198 SVEP1Q4LDE5 3571 aa10.11□□□□□ -0.79
C9orf3-201ENST00000277198 SONP18583 2426 aaKnown RBP10.1□□□□□ -0.79
C9orf3-201ENST00000277198 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 PRB3Q04118 309 aaPredicted RBP10.1□□□□□ -0.79
C9orf3-201ENST00000277198 SAPCD1Q5SSQ6 148 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 C17orf77Q96MU5 243 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 FANCD2OSQ96PS1 177 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 AP5S1Q9NUS5 200 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 PLXNB1O43157 2135 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 IGHV4-30-2A0A087WSY4 118 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 LY6G6DO95868 133 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 ARMS2P0C7Q2 107 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
C9orf3-201ENST00000277198 ARF6P62330 175 aa10.1□□□□□ -0.79
C9orf3-201ENST00000277198 M0QZ24 198 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 CRIP1P50238 77 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 EBI3Q14213 229 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 MINOS1Q5TGZ0 78 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 ZNF738Q8NE65 137 aa10.09□□□□□ -0.79
C9orf3-201ENST00000277198 ARPC1AQ92747 370 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms