RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 H3BRN7 92 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 THAP8Q8NA92 274 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 DKK1O94907 266 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 NBL1P41271 181 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 RNF114Q9Y508 228 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 DOCK9Q9BZ29 2069 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 DEFB131AP59861 70 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 ORMDL1Q9P0S3 153 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 POLR2AP24928 1970 aaKnown RBP7□□□□□ -1.29
SCUBE3-201ENST00000274938 DEFB125Q8N687 156 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 VWCEQ96DN2 955 aa7□□□□□ -1.29
SCUBE3-201ENST00000274938 SHISA9B4DS77 424 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 B5MCH6 92 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 J3KT08 172 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 ATOX1O00244 68 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 RGPD4Q7Z3J3 1758 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 H3BQ85 93 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 ZNF726P1Q15940 193 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 K7EM74 188 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 RHOHQ15669 191 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 SPACA3Q8IXA5 215 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 CYYR1Q96J86 154 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 COLQQ9Y215 455 aaPredicted RBP6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 COL24A1Q17RW2 1714 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 DEFB130BP0DP73 79 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 DEFB130AP0DP74 79 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 LMO1P25800 156 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 ANXA2RQ3ZCQ2 193 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 KIR2DL5BA0A0G2JN68 375 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 KIR2DL5BA0A0G2JPC4 375 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 NDUFS7O75251 213 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 CLPSP04118 112 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 PAX9P55771 341 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 MLANAQ16655 118 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 KIR2DL5AQ8N109 375 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 KLHL30-AS1Q8NEE0 82 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 EGR2P11161 476 aaPredicted RBP6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 HERV-K104P63124 156 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 ZNF493Q6ZR52 646 aa6.99□□□□□ -1.29
SCUBE3-201ENST00000274938 MBD3L4A6NDZ8 208 aaPredicted RBP6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 MBD3L3A6NE82 208 aaPredicted RBP6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 MBD3L5A6NJ08 208 aaPredicted RBP6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 PRSS47A8MTI9 375 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 MBD3L2Q8NHZ7 208 aaPredicted RBP6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 SHANK3Q9BYB0 1731 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 F6UB75 175 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 NDUFA4O00483 81 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 ZNF833PQ6ZTB9 187 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 K7ERJ3 54 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 IGKV1-16P04430 117 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 MIA3Q5JRA6 1907 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 CKAP5Q14008 2032 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 BAALC-AS2P0C853 105 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 Q8TCH9 128 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 KNCNA6PVL3 124 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 C11orf44Q8N8P7 122 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 C1orf43Q9BWL3 253 aa6.98□□□□□ -1.29
SCUBE3-201ENST00000274938 TRAV12-1A0A0B4J245 112 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 GATA3P23771 443 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 SMIM20Q8N5G0 67 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 ZNF747Q9BV97 191 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 IGHV2-70DA0A0C4DH43 119 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 C5orf63A6NC05 138 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 RS1O15537 224 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 DAD1P61803 113 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 C8orf86Q6ZUL3 223 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 TRIP12Q14669 1992 aaPredicted RBP6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 COL5A3P25940 1745 aaPredicted RBP6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 DOCK8Q8NF50 2099 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 IGHV1-69DA0A0B4J2H0 117 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 UBE2E1P51965 193 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 LINC00311Q8N616 119 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 ZNRF2Q8NHG8 242 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 DNAJC13O75165 2243 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 LINC01619G3V211 115 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 H0YGX0 51 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 NXPH4O95158 308 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 RNF144BQ7Z419 303 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 COA6Q5JTJ3 125 aaKnown RBP6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 THSD7AQ9UPZ6 1657 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 CACNA1DQ01668 2161 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 hADV29S1A0JD25 119 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 IGHG2P01859 326 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 AMTNQ6UX39 209 aa6.97□□□□□ -1.29
SCUBE3-201ENST00000274938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.96□□□□□ -1.29
SCUBE3-201ENST00000274938 LTAP01374 205 aa6.96□□□□□ -1.29
SCUBE3-201ENST00000274938 VWC2Q2TAL6 325 aa6.96□□□□□ -1.29
SCUBE3-201ENST00000274938 PRSS29PA6NIE9 313 aa6.96□□□□□ -1.29
SCUBE3-201ENST00000274938 PKIGQ9Y2B9 76 aa6.96□□□□□ -1.29
SCUBE3-201ENST00000274938 C17orf82Q86X59 251 aaPredicted RBP6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 MYO16Q9Y6X6 1858 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 PIKFYVEQ9Y2I7 2098 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 IGLL5B9A064 214 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 IGLC1P0CG04 106 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 GATA4P43694 442 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 IL15RAQ13261 267 aa6.96□□□□□ -1.3
SCUBE3-201ENST00000274938 Q6ZVH6 145 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms