RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 CRLF1O75462 422 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 RITA1Q96K30 269 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 OBP2BQ9NPH6 170 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 PRNDQ9UKY0 176 aa12.45□□□□□ -0.42
CTDSP1-201ENST00000273062 CECR9P0C854 216 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 LINC00305Q7Z4B0 112 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 HIST1H4GQ99525 98 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 NAV3Q8IVL0 2385 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 TRAV4A0A0B4J268 109 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 IGKV3-15P01624 115 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 SLC25A48Q6ZT89 311 aaKnown RBP12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 Q8IYB0 196 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 RAX2Q96IS3 184 aa12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 PTPRZ1P23471 2315 aaPredicted RBP12.44□□□□□ -0.42
CTDSP1-201ENST00000273062 CEACAM4O75871 244 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 TCRAP04437 139 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 PSMB2P49721 201 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 FAM159AQ6UWV7 190 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 RND1Q92730 232 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 IQCF6A8MYZ5 107 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 RHODO00212 210 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 SRD5A1P18405 259 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 PRNTQ86SH4 94 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 PPDPFLQ8WWR9 84 aa12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 MRPL36Q9P0J6 103 aaKnown RBP12.43□□□□□ -0.42
CTDSP1-201ENST00000273062 SPINT2O43291 252 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 CD69Q07108 199 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 KLF17Q5JT82 389 aaPredicted RBP12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 Q86TA4 180 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 FMC1Q96HJ9 113 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 ZMAT4Q9H898 229 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 TGFAP01135 160 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 NPYP01303 97 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 RIGQ13278 110 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 RUSC1-AS1Q66K80 236 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 IGF2-ASQ6U949 168 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 FAM90A1Q86YD7 464 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 PIFOQ8TCI5 191 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 ZNF714Q96N38 554 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 CADP27708 2225 aa12.42□□□□□ -0.42
CTDSP1-201ENST00000273062 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 C11orf53Q8IXP5 236 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 TMEM133Q9H2Q1 129 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 PIEZO2Q9H5I5 2752 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 IGHV1-18A0A0C4DH31 117 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 IGKCP01834 107 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 ORM2P19652 201 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 DLX4Q92988 240 aaPredicted RBP12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 GAS8-AS1O95177 125 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 MSMPQ1L6U9 139 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 TEN1Q86WV5 123 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 ZNF71Q9NQZ8 489 aaPredicted RBP12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 PROCRQ9UNN8 238 aa12.41□□□□□ -0.42
CTDSP1-201ENST00000273062 TRBV7-3A0A075B6L6 115 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 IGKV1D-37A0A075B6S9 117 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 TMEM8BA6NDV4 472 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 TIMM8AO60220 97 aaPredicted RBP12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 IGLV2-11P01706 119 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 ZNF688P0C7X2 276 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 PRCDQ00LT1 54 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 SRSF1Q07955 248 aaKnown RBP eCLIP12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 Q6ZQT7 251 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 NPIPB3Q92617 1050 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 Q9H3A6 140 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 TMEM160Q9NX00 188 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 FAM215AQ9Y5M1 114 aa12.4□□□□□ -0.42
CTDSP1-201ENST00000273062 TRAV40A0A0B4J280 105 aa12.4□□□□□ -0.43
CTDSP1-201ENST00000273062 LOC107984156A0A0G2JMH3 177 aa12.4□□□□□ -0.43
CTDSP1-201ENST00000273062 PRSS1P07477 247 aa12.4□□□□□ -0.43
CTDSP1-201ENST00000273062 ARL17AQ8IVW1 177 aa12.4□□□□□ -0.43
CTDSP1-201ENST00000273062 FOXC2Q99958 501 aa12.4□□□□□ -0.43
CTDSP1-201ENST00000273062 CEP295Q9C0D2 2601 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 APC2O95996 2303 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 MRPL51Q4U2R6 128 aaKnown RBP12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 ORMDL3Q8N138 153 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 GATD1Q8NB37 220 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 C8orf46Q8TAG6 207 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 TMEM158Q8WZ71 300 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 E7EUB6 86 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 IGKV1-16P04430 117 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 GAGE2BQ13066 116 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 GAGE2EQ4V326 116 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 GOLT1AQ6ZVE7 132 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 FBXL15Q9H469 300 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 GAGE2DQ9UEU5 116 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 U3KQK5 164 aa12.39□□□□□ -0.43
CTDSP1-201ENST00000273062 EVI2AP22794 236 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 C2orf83Q53S99 150 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 SPRNQ5BIV9 151 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 ZNF474Q6S9Z5 364 aaPredicted RBP12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 EXOC3-AS1Q8N2X6 119 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 RBMXL3Q8N7X1 1067 aaKnown RBP12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 PPP1R35Q8TAP8 253 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 ABCA1O95477 2261 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 FAM104BQ5XKR9 115 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 ANKRD29Q8N6D5 301 aa12.38□□□□□ -0.43
CTDSP1-201ENST00000273062 LINC01549A6NIU2 74 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 IGLV1-44P01699 117 aa12.37□□□□□ -0.43
CTDSP1-201ENST00000273062 SAA2P0DJI9 122 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms