RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 H0YJW9 148 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 IGLV2-14P01704 120 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 LOXL3P58215 753 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 GTSCR1Q86UQ5 136 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 C11orf53Q8IXP5 236 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 C21orf62Q9NYP8 219 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 ZNF492Q9P255 531 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 NCKAP5O14513 1909 aa9.27□□□□□ -0.92
CLSTN3-201ENST00000266546 NPIPB5A8MRT5 1133 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 EVI2AP22794 236 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 RAB9AP51151 201 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 ZNF134P52741 427 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 AMN1Q8IY45 258 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 WIPF2Q8TF74 440 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 DLX6P56179 175 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 PSG3Q16557 428 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 TTC32Q5I0X7 151 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 TEX36Q5VZQ5 186 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 METTL26Q96S19 204 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 C7orf69Q9H7B7 122 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 KIR3DL3Q8N743 410 aa9.27□□□□□ -0.93
CLSTN3-201ENST00000266546 SORL1Q92673 2214 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 IGHV3-23P01764 117 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 THBDP07204 575 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 PPIFP30405 207 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 KLF5Q13887 457 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 SP5Q6BEB4 398 aaPredicted RBP9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 GAFA1Q96PS6 74 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 ZNRD1Q9P1U0 126 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 SMPXQ9UHP9 88 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 TNRC6AQ8NDV7 1962 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 M0R381 172 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 PF4V1P10720 104 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 ZC2HC1BQ5TFG8 222 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 OR10J6PQ8NGY7 276 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM133Q9H2Q1 129 aa9.26□□□□□ -0.93
CLSTN3-201ENST00000266546 TNFRSF14Q92956 283 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 PCSK5Q92824 1860 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 LOC105371242A0A075B767 164 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 NDUFS8O00217 210 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 PRSS2P07478 247 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 LGALS3P17931 250 aaKnown RBP9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 COL27A1Q8IZC6 1860 aaPredicted RBP9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 COX6CP09669 75 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 ADAMTSL5Q6ZMM2 481 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 NDUFA4L2Q9NRX3 87 aa9.25□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM170BQ5T4T1 132 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 ASCL2Q99929 193 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 SHISA9B4DS77 424 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 K7EP34 96 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 HOXA3O43365 443 aaPredicted RBP9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 DYNLRB2Q8TF09 96 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 DPM3Q9P2X0 92 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 SMKR1H3BMG3 65 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 LHBP01229 141 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 LINC01559Q495D7 138 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 CHAC1Q9BUX1 264 aa9.24□□□□□ -0.93
CLSTN3-201ENST00000266546 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 A0A1W2PPI3 338 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 KLF17Q5JT82 389 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 PF4P02776 101 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM200BQ69YZ2 307 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 IGKV2-40A0A087WW87 121 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 SNCGO76070 127 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 IGKV2D-40P01614 121 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 CKS1BP61024 79 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM190Q8WZ59 177 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 FXYD5Q96DB9 178 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 KIR2DL4Q99706 377 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 CDH23Q9H251 3354 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 IGHV3-66A0A0C4DH42 116 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 ADORA2A-AS1P86434 159 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 SRSF1Q07955 248 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 DGAT2L7PQ6IED9 249 aa9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 DUX4L9Q6RFH8 374 aaPredicted RBP9.23□□□□□ -0.93
CLSTN3-201ENST00000266546 FAM106CPP0CH98 169 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 EFNA4P52798 201 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 C17orf58Q2M2W7 97 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 BEX4Q9NWD9 120 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 KAAG1Q9UBP8 84 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 SH2D1AO60880 128 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 WT1-ASQ06250 92 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 VCX2Q9H322 139 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 ZNF256Q9Y2P7 627 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM213A2RRL7 107 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 POU2AF1Q16633 256 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 PRSS57Q6UWY2 283 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 Q71RC1 249 aaPredicted RBP9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 LYPD1Q8N2G4 141 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 CSTL1Q9H114 145 aa9.22□□□□□ -0.93
CLSTN3-201ENST00000266546 TNRC18O15417 2968 aaPredicted RBP9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 SRRM4A7MD48 611 aaKnown RBP9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 TMEM238C9JI98 176 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 TAX1BP3O14907 124 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 NBR2O15453 112 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 LGALS9BQ3B8N2 356 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 LGALS9CQ6DKI2 356 aa9.21□□□□□ -0.93
CLSTN3-201ENST00000266546 TP53TG3Q9ULZ0 132 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms