RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 APRG1Q8IVJ8 170 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 RNF182Q8N6D2 247 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 KIR2DL5BQ8NHK3 375 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 NKX6-2Q9C056 277 aaPredicted RBP10.52□□□□□ -0.73
SSBP1-201ENST00000265304 COL7A1Q02388 2944 aa10.52□□□□□ -0.73
SSBP1-201ENST00000265304 HBE1P02100 147 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 HLA-DMBP28068 263 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 RANP62826 216 aaKnown RBP10.51□□□□□ -0.73
SSBP1-201ENST00000265304 BLOC1S1P78537 153 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 ZNF124Q15973 351 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 FAM74A1Q5RGS3 127 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 IGFL4Q6B9Z1 124 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 CCDC28AQ8IWP9 274 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 OR8A1Q8NGG7 326 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 RXFP4Q8TDU9 374 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 BLNKQ8WV28 456 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 RPUSD4Q96CM3 377 aaKnown RBP10.51□□□□□ -0.73
SSBP1-201ENST00000265304 LINC00052Q96N35 136 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 Q9H3A6 140 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 TMPRSS5Q9H3S3 457 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 AAMDCQ9H7C9 122 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 SRD5A3Q9H8P0 318 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 PPP1R14DQ9NXH3 145 aa10.51□□□□□ -0.73
SSBP1-201ENST00000265304 DNAH9Q9NYC9 4486 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 RBAKDNA6NC62 111 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 FAM74A7A6NL05 159 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 M0R3E3 92 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
SSBP1-201ENST00000265304 PPT1P50897 306 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 FGF8P55075 233 aaPredicted RBP10.5□□□□□ -0.73
SSBP1-201ENST00000265304 ICAM4Q14773 271 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 GDF5OSQ5U4N7 250 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 AMTNQ6UX39 209 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
SSBP1-201ENST00000265304 ZNF705FA8MVS1 300 aaPredicted RBP10.49□□□□□ -0.73
SSBP1-201ENST00000265304 ZNF705EA8MWA4 302 aaPredicted RBP10.49□□□□□ -0.73
SSBP1-201ENST00000265304 GGTLC3B5MD39 225 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 TEX46H3BTG2 121 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 IFNA7P01567 189 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 CCL20P78556 96 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 TCEAL7Q9BRU2 100 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 TGP01266 2768 aa10.49□□□□□ -0.73
SSBP1-201ENST00000265304 LOC102724200A0A096LPH7 203 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-201ENST00000265304 TRBV7-9A0A0J9YWB2 115 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 PGPA6NDG6 321 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 NPIPB6E9PJ23 425 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 UBE2CO00762 179 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 DUSP14O95147 198 aaKnown RBP10.48□□□□□ -0.73
SSBP1-201ENST00000265304 GIG44P09565 113 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-201ENST00000265304 FRMD6-AS1P0C7T7 363 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 DEFB1P60022 68 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 EBLN2Q6P2I7 272 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 MORN3Q6PF18 240 aaPredicted RBP10.48□□□□□ -0.73
SSBP1-201ENST00000265304 C5orf17Q8NAS9 161 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 ZNF738Q8NE65 137 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 FAM19A4Q96LR4 140 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 ODF3Q96PU9 254 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 TXNDC17Q9BRA2 123 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
SSBP1-201ENST00000265304 YTHDF2Q9Y5A9 579 aaKnown RBP10.48□□□□□ -0.73
SSBP1-201ENST00000265304 SERTM2A0A1B0GWG4 89 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 DIRC3C9JPN6 131 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 F6UB75 175 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 NDUFS6O75380 124 aaKnown RBP10.47□□□□□ -0.73
SSBP1-201ENST00000265304 SUMO1P63165 101 aaKnown RBP10.47□□□□□ -0.73
SSBP1-201ENST00000265304 STHQ8IWL8 128 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 LINC00477Q96M19 166 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 B9D2Q9BPU9 175 aa10.47□□□□□ -0.73
SSBP1-201ENST00000265304 NMBP08949 121 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
SSBP1-201ENST00000265304 CNN1P51911 297 aaKnown RBP10.46□□□□□ -0.73
SSBP1-201ENST00000265304 IFITM2Q01629 132 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 HAGHQ16775 308 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 Q6ZWC4 215 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 CSTL1Q9H114 145 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 MANBALQ9NQG1 85 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 EPDR1Q9UM22 224 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 LENEPQ9Y5L5 61 aa10.46□□□□□ -0.73
SSBP1-201ENST00000265304 FBLL1A6NHQ2 334 aaKnown RBP10.45□□□□□ -0.74
SSBP1-201ENST00000265304 TCRAP04437 139 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 CSN1S1P47710 185 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 APOC4P55056 127 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 OR10J6PQ8NGY7 276 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 AGPAT4-IT1Q9H0P7 198 aa10.45□□□□□ -0.74
SSBP1-201ENST00000265304 PAGE4O60829 102 aa10.44□□□□□ -0.74
SSBP1-201ENST00000265304 CRISP2P16562 243 aa10.44□□□□□ -0.74
SSBP1-201ENST00000265304 NUTF2P61970 127 aaKnown RBP10.44□□□□□ -0.74
SSBP1-201ENST00000265304 DEFB121Q5J5C9 76 aa10.44□□□□□ -0.74
SSBP1-201ENST00000265304 ZNF767PQ75MW2 155 aa10.44□□□□□ -0.74
SSBP1-201ENST00000265304 CMTM2Q8TAZ6 248 aa10.44□□□□□ -0.74
SSBP1-201ENST00000265304 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms