RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 XGP55808 180 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 MSMPQ1L6U9 139 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 ZNF562Q6V9R5 426 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 GOLT1AQ6ZVE7 132 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 OR10X1Q8NGY0 326 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 ANAPC13Q9BS18 74 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 MRPL36Q9P0J6 103 aaKnown RBP10.39□□□□□ -0.75
NUP54-201ENST00000264883 IGLV2-11P01706 119 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 GAGE5Q13069 117 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 GAGE6Q13070 117 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 TEX36Q5VZQ5 186 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 FAM104BQ5XKR9 115 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 Q6AWC8 147 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 AMN1Q8IY45 258 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 ZCCHC24Q8N2G6 241 aaKnown RBP10.39□□□□□ -0.75
NUP54-201ENST00000264883 OR4C13Q8NGP0 309 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 PIEZO1Q92508 2521 aa10.39□□□□□ -0.75
NUP54-201ENST00000264883 ZNF785A8K8V0 405 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 TNFAIP6P98066 277 aaPredicted RBP10.38□□□□□ -0.75
NUP54-201ENST00000264883 GTSCR1Q86UQ5 136 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 C8orf31Q8N9H6 132 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 RND1Q92730 232 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 SPTBN4Q9H254 2564 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 CACNA1GO43497 2377 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 IGKCP01834 107 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 ODF1Q14990 250 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 TAL2Q16559 108 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 SHISA2Q6UWI4 295 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 RITA1Q96K30 269 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 MRPL20Q9BYC9 149 aaKnown RBP10.38□□□□□ -0.75
NUP54-201ENST00000264883 OTORQ9NRC9 128 aa10.38□□□□□ -0.75
NUP54-201ENST00000264883 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 BOD1L1Q8NFC6 3051 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 MBD3L4A6NDZ8 208 aaPredicted RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 MBD3L3A6NE82 208 aaPredicted RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 MBD3L5A6NJ08 208 aaPredicted RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 M0R1B8 84 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 MRPL51Q4U2R6 128 aaKnown RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 KLF17Q5JT82 389 aaPredicted RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 MBD3L2Q8NHZ7 208 aaPredicted RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 TRGV9Q99603 122 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 RALYQ9UKM9 306 aaKnown RBP10.37□□□□□ -0.75
NUP54-201ENST00000264883 TMEM213A2RRL7 107 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 E7EUB6 86 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 EVI2AP22794 236 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 FHL3Q13643 280 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 SPRNQ5BIV9 151 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 Q6ZS92 163 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 LCNL1Q6ZST4 164 aa10.37□□□□□ -0.75
NUP54-201ENST00000264883 SPENQ96T58 3664 aaKnown RBP10.36□□□□□ -0.75
NUP54-201ENST00000264883 PRSS1P07477 247 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 PVRIGQ6DKI7 326 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 NFE4Q86UQ8 179 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 EXOC3-AS1Q8N2X6 119 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 LINC00311Q8N616 119 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 GLMPQ8WWB7 406 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 CCL13Q99616 98 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 ASCL2Q99929 193 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 B5MCH6 92 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 NPYP01303 97 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 IGHV1-46P01743 117 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 HLA-DRB4P13762 266 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 WT1-ASQ06250 92 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 VMA21Q3ZAQ7 101 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 ZC2HC1BQ5TFG8 222 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 HIST1H4GQ99525 98 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 HLA-DRB4X5D2U9 266 aa10.36□□□□□ -0.75
NUP54-201ENST00000264883 TRBV6-1A0A0K0K1D8 114 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 SMKR1H3BMG3 65 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 K7EM74 188 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 CRYGCP07315 174 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
NUP54-201ENST00000264883 FCER1GP30273 86 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 CKS2P33552 79 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 CFAP126Q5VTH2 177 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 LYZL1Q6UWQ5 148 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 FAM216BQ8N7L0 139 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 C8orf46Q8TAG6 207 aa10.35□□□□□ -0.75
NUP54-201ENST00000264883 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
NUP54-201ENST00000264883 FAM201AQ5SY85 155 aa10.34□□□□□ -0.75
NUP54-201ENST00000264883 DUX4L9Q6RFH8 374 aaPredicted RBP10.34□□□□□ -0.75
NUP54-201ENST00000264883 MAPKAPK5-AS1Q8N8E1 139 aa10.34□□□□□ -0.75
NUP54-201ENST00000264883 DPM2O94777 84 aa10.34□□□□□ -0.75
NUP54-201ENST00000264883 UFC1Q9Y3C8 167 aa10.34□□□□□ -0.75
NUP54-201ENST00000264883 HEATR1Q9H583 2144 aaKnown RBP10.34□□□□□ -0.75
NUP54-201ENST00000264883 TRBV7-9A0A0J9YWB2 115 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 TNFRSF1AP19438 455 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 LEPP41159 167 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 CRIP1P50238 77 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 FOXC2Q99958 501 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 PRSS29PA6NIE9 313 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 CGB1A6NKQ9 187 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 TNFRSF13BO14836 293 aaPredicted RBP10.33□□□□□ -0.76
NUP54-201ENST00000264883 HERV-K104P63124 156 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 C10orf55Q5SWW7 151 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 RUSC1-AS1Q66K80 236 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 ZFAND6Q6FIF0 208 aa10.33□□□□□ -0.76
NUP54-201ENST00000264883 ATMQ13315 3056 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms