RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 FMC1Q96HJ9 113 aa13.02□□□□□ -0.33
CTCF-201ENST00000264010 IGF2RP11717 2491 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 ZNF329Q86UD4 541 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 OR5A1Q8NGJ0 315 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 ZNF479Q96JC4 524 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 GOLT1AQ6ZVE7 132 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 OTORQ9NRC9 128 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 OOSP1A8MZH6 123 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 LHFPL4Q7Z7J7 247 aa13.01□□□□□ -0.33
CTCF-201ENST00000264010 ANKRD11Q6UB99 2663 aaPredicted RBP13.01□□□□□ -0.33
CTCF-201ENST00000264010 ZNF785A8K8V0 405 aa13□□□□□ -0.33
CTCF-201ENST00000264010 ECSCRQ19T08 205 aa13□□□□□ -0.33
CTCF-201ENST00000264010 ADORA2A-AS1P86434 159 aa13□□□□□ -0.33
CTCF-201ENST00000264010 C5orf64Q2M2E5 130 aa13□□□□□ -0.33
CTCF-201ENST00000264010 GAGE13Q4V321 117 aa13□□□□□ -0.33
CTCF-201ENST00000264010 BCL6BQ8N143 479 aaPredicted RBP13□□□□□ -0.33
CTCF-201ENST00000264010 LINC00479Q96M42 142 aa13□□□□□ -0.33
CTCF-201ENST00000264010 NDFIP1Q9BT67 221 aa13□□□□□ -0.33
CTCF-201ENST00000264010 S4R3C0 116 aa13□□□□□ -0.33
CTCF-201ENST00000264010 K7EN84 100 aa13□□□□□ -0.33
CTCF-201ENST00000264010 SEC11AP67812 179 aa13□□□□□ -0.33
CTCF-201ENST00000264010 CX3CL1P78423 397 aa13□□□□□ -0.33
CTCF-201ENST00000264010 VMO1Q7Z5L0 202 aa13□□□□□ -0.33
CTCF-201ENST00000264010 C21orf62Q9NYP8 219 aa13□□□□□ -0.33
CTCF-201ENST00000264010 C3orf56Q8N813 242 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
CTCF-201ENST00000264010 YPEL3P61236 119 aaPredicted RBP12.99□□□□□ -0.33
CTCF-201ENST00000264010 CFAP161Q6P656 301 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 V9GYV3 84 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 MINOS1Q5TGZ0 78 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 C1orf159Q96HA4 380 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 SLC25A39Q9BZJ4 359 aaPredicted RBP12.99□□□□□ -0.33
CTCF-201ENST00000264010 CYSLTR1Q9Y271 337 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 MINOS1-NBL1R4GNA1 71 aa12.99□□□□□ -0.33
CTCF-201ENST00000264010 CSMD1Q96PZ7 3565 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 CKS2P33552 79 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 SH2D6Q7Z4S9 175 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 EFNA4P52798 201 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 HBBP68871 147 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 RIGQ13278 110 aa12.98□□□□□ -0.33
CTCF-201ENST00000264010 COA6Q5JTJ3 125 aaKnown RBP12.98□□□□□ -0.33
CTCF-201ENST00000264010 RPP21Q9H633 154 aaKnown RBP12.98□□□□□ -0.33
CTCF-201ENST00000264010 BVES-AS1Q5T3Y7 98 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 FAM167A-AS1Q96KT0 104 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 NDUFB8O95169 186 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 FXYD5Q96DB9 178 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 TRBV20-1A0A075B6N2 111 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 J3KRW8 73 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 FRMD6-AS1P0C7T7 363 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 PDLIM4P50479 330 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
CTCF-201ENST00000264010 GAGE2BQ13066 116 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 GAGE2EQ4V326 116 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 LYRM7Q5U5X0 104 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 MORN5Q5VZ52 161 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 GAGE2DQ9UEU5 116 aa12.97□□□□□ -0.33
CTCF-201ENST00000264010 FSTL3O95633 263 aa12.96□□□□□ -0.33
CTCF-201ENST00000264010 TRAV8-1A0A0A6YYK1 113 aa12.96□□□□□ -0.33
CTCF-201ENST00000264010 TTC9CQ8N5M4 171 aa12.96□□□□□ -0.33
CTCF-201ENST00000264010 SYS1-DBNDD2H3BUS1 97 aa12.96□□□□□ -0.34
CTCF-201ENST00000264010 K7EMI3 77 aa12.96□□□□□ -0.34
CTCF-201ENST00000264010 ORM1P02763 201 aa12.96□□□□□ -0.34
CTCF-201ENST00000264010 KLF17Q5JT82 389 aaPredicted RBP12.96□□□□□ -0.34
CTCF-201ENST00000264010 ZFAND6Q6FIF0 208 aa12.96□□□□□ -0.34
CTCF-201ENST00000264010 ZNF503Q96F45 646 aa12.96□□□□□ -0.34
CTCF-201ENST00000264010 TCRAP04437 139 aa12.95□□□□□ -0.34
CTCF-201ENST00000264010 OR11H6Q8NGC7 330 aa12.95□□□□□ -0.34
CTCF-201ENST00000264010 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
CTCF-201ENST00000264010 OR10J3Q5JRS4 329 aa12.95□□□□□ -0.34
CTCF-201ENST00000264010 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
CTCF-201ENST00000264010 H3BMG7 143 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 IGLC1P0CG04 106 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 SYT8Q8NBV8 401 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 TMEM190Q8WZ59 177 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 ATMQ13315 3056 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 TANC2Q9HCD6 1990 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 M0R3E3 92 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 ZNF562Q6V9R5 426 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 IGHV3-23P01764 117 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 CRYGCP07315 174 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 HERV-K104P63124 156 aa12.94□□□□□ -0.34
CTCF-201ENST00000264010 CD300EQ496F6 205 aaPredicted RBP12.94□□□□□ -0.34
CTCF-201ENST00000264010 ZNF256Q9Y2P7 627 aaPredicted RBP12.94□□□□□ -0.34
CTCF-201ENST00000264010 TSPAN13O95857 204 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 PRSS2P07478 247 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 DMXL2Q8TDJ6 3036 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 IGKV1D-37A0A075B6S9 117 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 K7ERJ3 54 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 FAM231DQ6ZW35 169 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 MRAP2Q96G30 205 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 TOMM40O96008 361 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 PPBPP02775 128 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 TMEM95Q3KNT9 176 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 RASL11AQ6T310 242 aa12.93□□□□□ -0.34
CTCF-201ENST00000264010 TWIST1Q15672 202 aa12.92□□□□□ -0.34
CTCF-201ENST00000264010 EXOC3-AS1Q8N2X6 119 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms