RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CDKN1BP46527 198 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 DEFA1P59665 94 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 DEFA3P59666 94 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 LRRC37A5PQ49AS3 106 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 OR10J6PQ8NGY7 276 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 NPCDR1Q9BY65 106 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 ZNF586Q9NXT0 402 aa11.41□□□□□ -0.58
USE1-201ENST00000263897 LYRM9A8MSI8 78 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 HTN3P15516 51 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 H2BFSP57053 126 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 TAS2R60P59551 318 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 POM121L12Q8N7R1 296 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 BATF3Q9NR55 127 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 TMEM14CQ9P0S9 112 aa11.4□□□□□ -0.58
USE1-201ENST00000263897 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
USE1-201ENST00000263897 TRBV19A0A075B6N1 114 aa11.39□□□□□ -0.59
USE1-201ENST00000263897 PLAC8L1A1L4L8 177 aa11.39□□□□□ -0.59
USE1-201ENST00000263897 ZNF253O75346 499 aa11.39□□□□□ -0.59
USE1-201ENST00000263897 HIST1H1EP10412 219 aaKnown RBP11.39□□□□□ -0.59
USE1-201ENST00000263897 THAP6Q8TBB0 222 aa11.39□□□□□ -0.59
USE1-201ENST00000263897 HTN1P15515 57 aa11.38□□□□□ -0.59
USE1-201ENST00000263897 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
USE1-201ENST00000263897 GCSAMLQ5JQS6 135 aa11.38□□□□□ -0.59
USE1-201ENST00000263897 PPP1R1CQ8WVI7 109 aa11.38□□□□□ -0.59
USE1-201ENST00000263897 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
USE1-201ENST00000263897 NPIPB6E9PJ23 425 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 H7BYZ3 331 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 SSNA1O43805 119 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 NDUFB4O95168 129 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 CT45A10P0DMU9 189 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 DEFB130BP0DP73 79 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 DEFB130AP0DP74 79 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 CLINT1Q14677 625 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 FCN2Q15485 313 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 ZNF493Q6ZR52 646 aa11.37□□□□□ -0.59
USE1-201ENST00000263897 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
USE1-201ENST00000263897 PYYP10082 97 aa11.36□□□□□ -0.59
USE1-201ENST00000263897 PDE6HQ13956 83 aa11.36□□□□□ -0.59
USE1-201ENST00000263897 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
USE1-201ENST00000263897 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
USE1-201ENST00000263897 ODF3Q96PU9 254 aa11.36□□□□□ -0.59
USE1-201ENST00000263897 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
USE1-201ENST00000263897 PRELID1Q9Y255 219 aa11.36□□□□□ -0.59
USE1-201ENST00000263897 TIMM9Q9Y5J7 89 aa11.36□□□□□ -0.59
USE1-201ENST00000263897 TIMM8BQ9Y5J9 83 aaPredicted RBP11.36□□□□□ -0.59
USE1-201ENST00000263897 M0R3E3 92 aa11.35□□□□□ -0.59
USE1-201ENST00000263897 MPC2O95563 127 aa11.35□□□□□ -0.59
USE1-201ENST00000263897 GFI1BQ5VTD9 330 aa11.35□□□□□ -0.59
USE1-201ENST00000263897 TMEM88Q6PEY1 159 aa11.35□□□□□ -0.59
USE1-201ENST00000263897 FAM167A-AS1Q96KT0 104 aa11.35□□□□□ -0.59
USE1-201ENST00000263897 SLC25A2Q9BXI2 301 aa11.35□□□□□ -0.59
USE1-201ENST00000263897 CBY3A6NI87 242 aa11.34□□□□□ -0.59
USE1-201ENST00000263897 LEPP41159 167 aa11.34□□□□□ -0.59
USE1-201ENST00000263897 MIR17HGQ75NE6 70 aa11.34□□□□□ -0.59
USE1-201ENST00000263897 RNASE8Q8TDE3 154 aaKnown RBP11.34□□□□□ -0.59
USE1-201ENST00000263897 TMEM263Q8WUH6 116 aaKnown RBP11.34□□□□□ -0.59
USE1-201ENST00000263897 BLNKQ8WV28 456 aa11.34□□□□□ -0.59
USE1-201ENST00000263897 KCNIP2Q9NS61 270 aa11.34□□□□□ -0.59
USE1-201ENST00000263897 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 PET100P0DJ07 73 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 ERCC8Q13216 396 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 RNF212Q495C1 297 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 CCDC28AQ8IWP9 274 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 EXOC3-AS1Q8N2X6 119 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 ATP5SQ99766 215 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 OR51M1Q9H341 326 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 AAMDCQ9H7C9 122 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 NOP10Q9NPE3 64 aaKnown RBP11.33□□□□□ -0.6
USE1-201ENST00000263897 HSPB11Q9Y547 144 aa11.33□□□□□ -0.6
USE1-201ENST00000263897 FRAS1Q86XX4 4008 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 TRAV12-3A0A0B4J271 114 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 F5H768 121 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 J3KRW8 73 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 ATP5G1P05496 136 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 RPL12P30050 165 aaKnown RBP11.32□□□□□ -0.6
USE1-201ENST00000263897 ATP5G3P48201 142 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 UBE2DNLQ8IWF7 75 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 C15orf53Q8NAA6 179 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 MRPL32Q9BYC8 188 aaKnown RBP11.32□□□□□ -0.6
USE1-201ENST00000263897 FUT9Q9Y231 359 aa11.32□□□□□ -0.6
USE1-201ENST00000263897 DNAH10Q8IVF4 4471 aa11.31□□□□□ -0.6
USE1-201ENST00000263897 DNAH6Q9C0G6 4158 aa11.31□□□□□ -0.6
USE1-201ENST00000263897 SLC25A5P05141 298 aaKnown RBP11.31□□□□□ -0.6
USE1-201ENST00000263897 ICAM4Q14773 271 aa11.31□□□□□ -0.6
USE1-201ENST00000263897 RNF141Q8WVD5 230 aa11.31□□□□□ -0.6
USE1-201ENST00000263897 FAM19A4Q96LR4 140 aa11.31□□□□□ -0.6
USE1-201ENST00000263897 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
USE1-201ENST00000263897 M0R2N4 97 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 IFNA5P01569 189 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 OR10J4P0C629 311 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 SCGB1C1Q8TD33 95 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 FXYD5Q96DB9 178 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 PYGO2Q9BRQ0 406 aa11.3□□□□□ -0.6
USE1-201ENST00000263897 SMIM3Q9BZL3 60 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms