RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 DNAJC13O75165 2243 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 ZNRF2Q8NHG8 242 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 TMEM126AQ9H061 195 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 EDA2RQ9HAV5 297 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 A0A0J9YY99 117 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 C15orf62A8K5M9 175 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 NPC2P61916 151 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 ADMP35318 185 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 ZNF134P52741 427 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 SH2D6Q7Z4S9 175 aa10.81□□□□□ -0.68
PDGFRB-201ENST00000261799 UBE2BP63146 152 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 GBF1Q92538 1859 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 RPL32P62910 135 aaKnown RBP10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 QRFPP83859 136 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 ANAPC10Q9UM13 185 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 LOXL1Q08397 574 aaPredicted RBP10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 C4orf3Q8WVX3 66 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 C16orf74Q96GX8 76 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 DERL1Q9BUN8 251 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 RALGAPA1Q6GYQ0 2036 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 ANGP03950 147 aaKnown RBP10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 C5orf24Q7Z6I8 188 aa10.8□□□□□ -0.68
PDGFRB-201ENST00000261799 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 TIMM21Q9BVV7 248 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 NOP10Q9NPE3 64 aaKnown RBP10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 AGMATQ9BSE5 352 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 PARD6GQ9BYG4 376 aaPredicted RBP10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 H3BRN7 92 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 FAM19A2Q8N3H0 131 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 ASXL3Q9C0F0 2248 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 SNAI2O43623 268 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 TMEM95Q3KNT9 176 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 KLF12Q9Y4X4 402 aa10.79□□□□□ -0.68
PDGFRB-201ENST00000261799 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 INSL3P51460 131 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 NIT1Q86X76 327 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 PRIMA1Q86XR5 153 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 ZNF581Q9P0T4 197 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 TYMSP04818 313 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 LAMTOR2Q9Y2Q5 125 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 ATP5G1P05496 136 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 MLANAQ16655 118 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 NDUFA11Q86Y39 141 aa10.78□□□□□ -0.68
PDGFRB-201ENST00000261799 ATXN8Q156A1 80 aa10.77□□□□□ -0.68
PDGFRB-201ENST00000261799 SVILO95425 2214 aa10.77□□□□□ -0.68
PDGFRB-201ENST00000261799 SHISA2Q6UWI4 295 aa10.77□□□□□ -0.68
PDGFRB-201ENST00000261799 CTSZQ9UBR2 303 aa10.77□□□□□ -0.68
PDGFRB-201ENST00000261799 DNAJC9-AS1A6NH13 148 aa10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 K7ERU9 68 aa10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 PRO3102Q9H379 93 aa10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 ZFP36P26651 326 aaKnown RBP10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 SRSF2Q01130 221 aaKnown RBP10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 Q9HAA7 133 aa10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 WIPF2Q8TF74 440 aaPredicted RBP10.77□□□□□ -0.69
PDGFRB-201ENST00000261799 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 IFITM2Q01629 132 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 LY96Q9Y6Y9 160 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 RNF144BQ7Z419 303 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 GFRA4Q9GZZ7 299 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 MRPL23Q16540 153 aaKnown RBP10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 PRSS57Q6UWY2 283 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 C1orf43Q9BWL3 253 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 IGLV2-23P01705 113 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 TMEM141Q96I45 108 aa10.76□□□□□ -0.69
PDGFRB-201ENST00000261799 TRBV19A0A075B6N1 114 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 PMVKQ15126 192 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 FBXL19-AS1Q494R0 122 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 RNF152Q8N8N0 203 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 TPSG1Q9NRR2 321 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 CACNA1GO43497 2377 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 INAFM1C9JVW0 142 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 TM2D2Q9BX73 214 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 NPBQ8NG41 125 aa10.75□□□□□ -0.69
PDGFRB-201ENST00000261799 PRSS29PA6NIE9 313 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 DIAPH2-AS1Q14236 149 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 LY6G6FQ5SQ64 297 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 TMEM242Q9NWH2 141 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 TMEM14CQ9P0S9 112 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 MRPL53Q96EL3 112 aaKnown RBP10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 TMEM89A2RUT3 159 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 SERF1AO75920 110 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 KLF5Q13887 457 aaPredicted RBP10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 APRG1Q8IVJ8 170 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 TMEM170AQ8WVE7 144 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 TRAV8-1A0A0A6YYK1 113 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 C15orf53Q8NAA6 179 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 ZDBF2Q9HCK1 2354 aa10.74□□□□□ -0.69
PDGFRB-201ENST00000261799 TRAV25A0A0B4J276 109 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 IGHV3-38A0A0C4DH36 116 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 BTCP35070 178 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 PLA2G2AP14555 144 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
PDGFRB-201ENST00000261799 H0YIZ8 118 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms