RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 PRSS29PA6NIE9 313 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 RNASE2P10153 161 aaKnown RBP8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 C5orf47Q569G3 176 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 C9orf139Q6ZV77 190 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 MRPS18CQ9Y3D5 142 aaKnown RBP8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 MLANAQ16655 118 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 MRPL23Q16540 153 aaKnown RBP8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 TAF1LQ8IZX4 1826 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 ADAMTS7Q9UKP4 1686 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 IGLL5B9A064 214 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 NDUFS7O75251 213 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 IGLC1P0CG04 106 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 LINC00205P59089 165 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 C15orf32Q32M92 178 aa8.7□□□□□ -1.02
SLC6A4-201ENST00000261707 TDRD15B5MCY1 1934 aaKnown RBP8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 H0YJW9 148 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 PAX9P55771 341 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 UBE2BP63146 152 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 TRAV26-2A0A0B4J265 109 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 IGHG3P01860 377 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 KLF5Q13887 457 aaPredicted RBP8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 DSCR8Q96T75 97 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 FOXI2Q6ZQN5 318 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 NKAPP1Q8N9T2 125 aa8.69□□□□□ -1.02
SLC6A4-201ENST00000261707 C5orf63A6NC05 138 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 NDPQ00604 133 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 ZCCHC24Q8N2G6 241 aaKnown RBP8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 SHANK2-AS3Q9BTD1 123 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 CFPP27918 469 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 CD177Q8N6Q3 437 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 IGLV3-32A0A0A0MS00 114 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 F8VRH5 84 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 CRLF1O75462 422 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 Q6P435 159 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 STRCQ7RTU9 1775 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 CFC1P0CG37 223 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 FAM236AA0A1B0GUQ0 79 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 FAM236BA0A1B0GV22 79 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 KLRD1Q13241 179 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 PCP2Q8IVA1 136 aa8.68□□□□□ -1.02
SLC6A4-201ENST00000261707 KNCNA6PVL3 124 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 SS18Q15532 418 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 IL17DQ8TAD2 202 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 NDUFA12Q9UI09 145 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 ATOX1O00244 68 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 MSMBP08118 114 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 PDE6HQ13956 83 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 PKIGQ9Y2B9 76 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 IGHV1-3A0A0C4DH29 117 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 GATA3P23771 443 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 TDRG1Q3Y452 100 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 MTCL1Q9Y4B5 1905 aaKnown RBP8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 CFHR3Q02985 330 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 THAP8Q8NA92 274 aa8.67□□□□□ -1.02
SLC6A4-201ENST00000261707 LINC01619G3V211 115 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 I3L3M4 83 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 K7EN84 100 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 K7ENP7 123 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 COA6Q5JTJ3 125 aaKnown RBP8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 ASPHD1Q5U4P2 390 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 TMEM200BQ69YZ2 307 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 J3QQQ9 107 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 TAX1BP3O14907 124 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 BPESC1Q9GZL8 116 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 LYPD6BQ8NI32 183 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 ZNF747Q9BV97 191 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 IGHV1-18A0A0C4DH31 117 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 FOXG1P55316 489 aaPredicted RBP8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 HERV-K104P63124 156 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 PLXNB2O15031 1838 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 A0A1B0GX51 115 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 BAALC-AS2P0C853 105 aa8.66□□□□□ -1.02
SLC6A4-201ENST00000261707 WFDC2Q14508 124 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 LOC285556D6RIA3 1793 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 APC2O95996 2303 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 MCM3APO60318 1980 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 TRBV7-1A0A0A6YYK4 115 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 SRRM5B3KS81 715 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 IGHG2P01859 326 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 FOXI1Q12951 378 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 Q8NFD4 153 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 PFN2P35080 140 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 HS3ST6Q96QI5 342 aa8.65□□□□□ -1.02
SLC6A4-201ENST00000261707 A0A0G2JNJ9 132 aa8.65□□□□□ -1.03
SLC6A4-201ENST00000261707 IGHV1-8P0DP01 117 aa8.65□□□□□ -1.03
SLC6A4-201ENST00000261707 Q9UFV3 132 aa8.65□□□□□ -1.03
SLC6A4-201ENST00000261707 IGHV1-46P01743 117 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 WIPF2Q8TF74 440 aaPredicted RBP8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 A0A0B4J2C4 111 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 NUPR1O60356 82 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 RNF5Q99942 180 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 TDRD6O60522 2096 aaKnown RBP8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 TRAV25A0A0B4J276 109 aa8.64□□□□□ -1.03
SLC6A4-201ENST00000261707 BRK1Q8WUW1 75 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms