RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 GAGE12GP0CL81 117 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 GAGE12IP0CL82 117 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 AZU1P20160 251 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 Q6ZR03 302 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 MPDZO75970 2070 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 TANC1Q9C0D5 1861 aa9.71□□□□□ -0.85
COL8A1-201ENST00000261037 VWC2LB2RUY7 222 aa9.71□□□□□ -0.86
COL8A1-201ENST00000261037 WDR86Q86TI4 376 aa9.71□□□□□ -0.86
COL8A1-201ENST00000261037 LY6G5BQ8NDX9 201 aa9.71□□□□□ -0.86
COL8A1-201ENST00000261037 IGHV2-70DA0A0C4DH43 119 aa9.71□□□□□ -0.86
COL8A1-201ENST00000261037 C17orf58Q2M2W7 97 aa9.71□□□□□ -0.86
COL8A1-201ENST00000261037 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
COL8A1-201ENST00000261037 PFN2P35080 140 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 TEX36Q5VZQ5 186 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 ZFAND6Q6FIF0 208 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 Q6ZS49 121 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 FREM3P0C091 2139 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 LYL1P12980 280 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 DIAPH2-AS1Q14236 149 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF833PQ6ZTB9 187 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
COL8A1-201ENST00000261037 NDUFS8O00217 210 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 PMVKQ15126 192 aa9.7□□□□□ -0.86
COL8A1-201ENST00000261037 GAGE2BQ13066 116 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 GAGE6Q13070 117 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 NDUFA4L2Q9NRX3 87 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 TCF20Q9UGU0 1960 aaKnown RBP9.69□□□□□ -0.86
COL8A1-201ENST00000261037 PRSS57Q6UWY2 283 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 IGFBPL1Q8WX77 278 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 TMEM14BQ9NUH8 114 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 MRPL27Q9P0M9 148 aaKnown RBP9.69□□□□□ -0.86
COL8A1-201ENST00000261037 KIF26BQ2KJY2 2108 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 TP53BP1Q12888 1972 aaPredicted RBP9.69□□□□□ -0.86
COL8A1-201ENST00000261037 LY6G6EA0A0G2JKS1 128 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 EDA2RQ9HAV5 297 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 U3KQA8 63 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 APC2O95996 2303 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF561-AS1K7EIQ3 104 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
COL8A1-201ENST00000261037 GFRA4Q9GZZ7 299 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 C9JAW5 83 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 PROK2Q9HC23 129 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 TICRRQ7Z2Z1 1910 aa9.69□□□□□ -0.86
COL8A1-201ENST00000261037 CR1LQ2VPA4 569 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 ARTNQ5T4W7 220 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 SRSF8Q9BRL6 282 aaKnown RBP9.68□□□□□ -0.86
COL8A1-201ENST00000261037 ANXA2RQ3ZCQ2 193 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 CLPSL2Q6UWE3 100 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 TRBV25-1A0A075B6N4 114 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 TCF15Q12870 199 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 TMEM190Q8WZ59 177 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
COL8A1-201ENST00000261037 NLRC5Q86WI3 1866 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 ICE1Q9Y2F5 2266 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 C9JQL5 133 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 FNDC10F2Z333 226 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 I3L3M4 83 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 NXPH4O95158 308 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 PDE6HQ13956 83 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 TCTEX1D4Q5JR98 221 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 Q8TCH9 128 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 LOXP28300 417 aaPredicted RBP9.67□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF664Q8N3J9 261 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 TRBV19A0A075B6N1 114 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 RNASE13Q5GAN3 156 aaKnown RBP9.67□□□□□ -0.86
COL8A1-201ENST00000261037 CITED2Q99967 270 aaPredicted RBP9.67□□□□□ -0.86
COL8A1-201ENST00000261037 GTSF1LQ9H1H1 148 aa9.67□□□□□ -0.86
COL8A1-201ENST00000261037 PRSS46E5RG02 174 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 MST1LQ2TV78 715 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 ADAMTSL5Q6ZMM2 481 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF524Q96C55 264 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 PTPRDP23468 1912 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 IGHV1OR15-1A0A075B7D0 117 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 HAPLN4Q86UW8 402 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 CGB3P0DN86 165 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 MMP23AO75900 390 aa9.66□□□□□ -0.86
COL8A1-201ENST00000261037 CEACAM8P31997 349 aaPredicted RBP9.66□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 C2orf66Q6UXQ4 117 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 ALPK2Q86TB3 2170 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 YPEL3P61236 119 aaPredicted RBP9.65□□□□□ -0.86
COL8A1-201ENST00000261037 RPL32P62910 135 aaKnown RBP9.65□□□□□ -0.86
COL8A1-201ENST00000261037 MRPL51Q4U2R6 128 aaKnown RBP9.65□□□□□ -0.86
COL8A1-201ENST00000261037 THAP8Q8NA92 274 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 GATA3P23771 443 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 LURAP1LQ8IV03 231 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 ZNF492Q9P255 531 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 ESPL1Q14674 2120 aa9.65□□□□□ -0.86
COL8A1-201ENST00000261037 DLEU1O43261 78 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 POLR3KQ9Y2Y1 108 aaPredicted RBP9.65□□□□□ -0.87
COL8A1-201ENST00000261037 H3BRN7 92 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 IGKV1-39P01597 117 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 IGKV1D-39P04432 117 aa9.65□□□□□ -0.87
COL8A1-201ENST00000261037 Q8N8P6 123 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms