RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 CDSNQ15517 529 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 C10orf55Q5SWW7 151 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 GOLT1AQ6ZVE7 132 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 SVIPQ8NHG7 77 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 RAB37Q96AX2 223 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 SIGMAR1Q99720 223 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 MAP1BP46821 2468 aaKnown RBP8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 TRAV8-1A0A0A6YYK1 113 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 IGHV3-72A0A0B4J1Y9 119 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 PRTN3P24158 256 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 FAM104BQ5XKR9 115 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 CCDC144NLQ6NUI1 221 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 IFI27L1Q96BM0 104 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 PRELID3AQ96N28 172 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 TPSG1Q9NRR2 321 aa8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 F11RQ9Y624 299 aaKnown RBP8.5□□□□□ -1.05
CHRNA1-201ENST00000261007 TNCP24821 2201 aa8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 FAM106CPP0CH98 169 aa8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 NAA38Q9BRA0 125 aaKnown RBP8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 PSG8Q9UQ74 426 aa8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 ZFHX4Q86UP3 3567 aa8.49□□□□□ -1.05
CHRNA1-201ENST00000261007 D6R8Y8 96 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 H3BTX0 84 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 J3QR89 54 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 LOXL1Q08397 574 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 PLGLAQ15195 96 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 PRSS57Q6UWY2 283 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 RITA1Q96K30 269 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 VGLL1Q99990 258 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 SLC25A39Q9BZJ4 359 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 PKDREJQ9NTG1 2253 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 TRBV19A0A075B6N1 114 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 TMEM8BA6NDV4 472 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 LINC01546A6NGU7 62 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 FBLL1A6NHQ2 334 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 F8W1H4 67 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 GOSR1O95249 250 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 AZU1P20160 251 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 BMI1P35226 326 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 SRSF1Q07955 248 aaKnown RBP eCLIP8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 CD300EQ496F6 205 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 MINOS1Q5TGZ0 78 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 PCP2Q8IVA1 136 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 EXOC3-AS1Q8N2X6 119 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 NPBQ8NG41 125 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 MINOS1-NBL1R4GNA1 71 aa8.48□□□□□ -1.05
CHRNA1-201ENST00000261007 SPTBN2O15020 2390 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 LOC389332A0A1B0GUA5 103 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 TEX48A0A1B0GUV7 120 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 TEX22C9J3V5 150 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 NBR2O15453 112 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 NDUFS7O75251 213 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 NDUFA3O95167 84 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 HLA-DRB4P13762 266 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 NMUP48645 174 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 RUSC1-AS1Q66K80 236 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 HLA-DRB4X5D2U9 266 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 ROS1P08922 2347 aa8.47□□□□□ -1.05
CHRNA1-201ENST00000261007 A0A1B0GV72 72 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 SERTM2A0A1B0GWG4 89 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 TIMM23O14925 209 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 GNG7O60262 68 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 CRIP1P50238 77 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 HCP5Q6MZN7 132 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 BCL6BQ8N143 479 aaPredicted RBP8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 PHLDA1Q8WV24 401 aaPredicted RBP8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 TM2D2Q9BX73 214 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 FBXL15Q9H469 300 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 MALRD1Q5VYJ5 2156 aa8.46□□□□□ -1.05
CHRNA1-201ENST00000261007 CNTFRP26992 372 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 EFNA4P52798 201 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 LYZP61626 148 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 LY6DQ14210 128 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 LYZL1Q6UWQ5 148 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 COX8CQ7Z4L0 72 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 S100A7AQ86SG5 101 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 ITLN2Q8WWU7 325 aaPredicted RBP8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 CFHR4Q92496 578 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 SPATA25Q9BR10 227 aa8.46□□□□□ -1.06
CHRNA1-201ENST00000261007 CFAP47Q6ZTR5 3102 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 DSPP15924 2871 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 GAGE12HA6NDE8 117 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 E9PLD3 99 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 ZNF207O43670 478 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 CNIH1O95406 144 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 SIGLEC15Q6ZMC9 328 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 AMN1Q8IY45 258 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 SHANK2-AS3Q9BTD1 123 aa8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 TLN1Q9Y490 2541 aaKnown RBP8.45□□□□□ -1.06
CHRNA1-201ENST00000261007 WI2-2373I1.2A0A1W2PRP0 233 aa8.44□□□□□ -1.06
CHRNA1-201ENST00000261007 EVI2AP22794 236 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms