RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 EDA2RQ9HAV5 297 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 TOMM7Q9P0U1 55 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 GNG5P63218 68 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 Q8N9W7 124 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 COX11Q9Y6N1 276 aa10.59□□□□□ -0.71
PRPF38A-201ENST00000257181 ZNF876PQ49A33 203 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 GNB1LQ9BYB4 327 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 IGLV1-47P01700 117 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 APOHP02749 345 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 NMBP08949 121 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 Q86TA4 180 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 RNF126Q9BV68 326 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 PHOX2AO14813 284 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 IGHG4P01861 327 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 CRLF1O75462 422 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 AGMATQ9BSE5 352 aa10.58□□□□□ -0.72
PRPF38A-201ENST00000257181 RNF224P0DH78 156 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 CBLN1P23435 193 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 TMEM141Q96I45 108 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 ZNF491Q8N8L2 437 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 MDC1Q14676 2089 aaKnown RBP10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 TTC32Q5I0X7 151 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 MS4A6AQ9H2W1 248 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 AURKAIP1Q9NWT8 199 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 IGLV11-55A0A075B6I3 123 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 VWC2LB2RUY7 222 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 F8WEM9 126 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 IGF1P05019 195 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 IGLC1P0CG04 106 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 C1orf147Q96MC9 270 aaPredicted RBP10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 C10orf126Q8N4M7 172 aa10.57□□□□□ -0.72
PRPF38A-201ENST00000257181 CNOT1A5YKK6 2376 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 PCNX2A6NKB5 2137 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 MUC6Q6W4X9 2439 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 ZFP36P26651 326 aaKnown RBP10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 OR10D4PQ8NGN7 298 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 PAX9P55771 341 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 NIT2Q9NQR4 276 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 ADAMTS9Q9P2N4 1935 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 SDHCQ99643 169 aaPredicted RBP10.56□□□□□ -0.72
PRPF38A-201ENST00000257181 RNF222A6NCQ9 220 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 I3L3M4 83 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 PLNP26678 52 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 CARHSP1Q9Y2V2 147 aaKnown RBP10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 PLXNB3Q9ULL4 1909 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 TRBV7-9A0A0J9YWB2 115 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 K7EMI3 77 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 C2orf70A6NJV1 201 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 DUX4L9Q6RFH8 374 aaPredicted RBP10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 NRGNQ92686 78 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 IGF2BP2-AS1Q96M15 143 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 KLK15Q9H2R5 256 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 SPRY2O43597 315 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 Q8N7P7 452 aa10.55□□□□□ -0.72
PRPF38A-201ENST00000257181 CFHR4Q92496 578 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 CITED2Q99967 270 aaPredicted RBP10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 FER1L5A0AVI2 2057 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 IGLC7A0M8Q6 106 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 LIME1Q9H400 295 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 SPINK13Q1W4C9 94 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 S100A7L2Q5SY68 101 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 LYPD6Q86Y78 171 aa10.54□□□□□ -0.72
PRPF38A-201ENST00000257181 FXYD7P58549 80 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 EXOC3-AS1Q8N2X6 119 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 TRGC2P03986 189 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 GAGE12BA1L429 117 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 PRSS46E5RG02 174 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 GAGE7O76087 117 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 GAGE12FP0CL80 117 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 GAGE12GP0CL81 117 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 GAGE12IP0CL82 117 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 DPM2O94777 84 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 CGB3P0DN86 165 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 PSMG3-AS1Q96PY0 264 aa10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 CHTOPQ9Y3Y2 248 aaKnown RBP10.53□□□□□ -0.72
PRPF38A-201ENST00000257181 NUP210LQ5VU65 1888 aa10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 BTCP35070 178 aa10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 ADMP35318 185 aa10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 RPL24P83731 157 aaKnown RBP10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 SLC25A34Q6PIV7 304 aa10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 RPP25LQ8N5L8 163 aaKnown RBP10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 ODF3Q96PU9 254 aa10.52□□□□□ -0.72
PRPF38A-201ENST00000257181 WT1-ASQ06250 92 aa10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 LINC00469Q8N7U9 141 aa10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 TMEM238C9JI98 176 aa10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 SLURP1P55000 103 aa10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 EBI3Q14213 229 aa10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 RIF1Q5UIP0 2472 aaKnown RBP10.52□□□□□ -0.73
PRPF38A-201ENST00000257181 MYMXA0A1B0GTQ4 84 aa10.51□□□□□ -0.73
PRPF38A-201ENST00000257181 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms