RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 BLNKQ8WV28 456 aa17.56■□□□□ 0.4
SDF2L1-201ENST00000248958 CSMD3Q7Z407 3707 aa17.56■□□□□ 0.4
SDF2L1-201ENST00000248958 FXYD6-FXYD2A0A087WZ82 144 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 M0R2Z0 102 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 CRXO43186 299 aaPredicted RBP17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 NDUFB4O95168 129 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 HBE1P02100 147 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 M6PRP20645 277 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 KHDC3LQ587J8 217 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 RNF141Q8WVD5 230 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 TMEM208Q9BTX3 173 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 TNFSF18Q9UNG2 199 aa17.55■□□□□ 0.4
SDF2L1-201ENST00000248958 LCE6AA0A183 80 aa17.54■□□□□ 0.4
SDF2L1-201ENST00000248958 OR7C2O60412 319 aa17.54■□□□□ 0.4
SDF2L1-201ENST00000248958 JTBO76095 146 aa17.54■□□□□ 0.4
SDF2L1-201ENST00000248958 CDKN1BP46527 198 aa17.54■□□□□ 0.4
SDF2L1-201ENST00000248958 PSMG3Q9BT73 122 aaPredicted RBP17.54■□□□□ 0.4
SDF2L1-201ENST00000248958 C11orf94C9JXX5 98 aa17.53■□□□□ 0.4
SDF2L1-201ENST00000248958 TSPOP30536 169 aa17.53■□□□□ 0.4
SDF2L1-201ENST00000248958 RRN3P1Q2M238 152 aa17.53■□□□□ 0.4
SDF2L1-201ENST00000248958 FXYD5Q96DB9 178 aa17.53■□□□□ 0.4
SDF2L1-201ENST00000248958 A0A1W2PPV4 95 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 PRAC2D3DTV9 90 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 LYPD1Q8N2G4 141 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 TMEM256Q8N2U0 113 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 HSD17B11Q8NBQ5 300 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 OR2G3Q8NGZ4 309 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 ODF3Q96PU9 254 aa17.52■□□□□ 0.4
SDF2L1-201ENST00000248958 BORCS7-ASMTA0A0B4J1R7 106 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 TEX48A0A1B0GUV7 120 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 RNF222A6NCQ9 220 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 NPIPB6E9PJ23 425 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 OR10J4P0C629 311 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 SERF2P84101 59 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 BAP18Q8IXM2 172 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 C20orf144Q9BQM9 153 aa17.51■□□□□ 0.39
SDF2L1-201ENST00000248958 M0R3E3 92 aa17.5■□□□□ 0.39
SDF2L1-201ENST00000248958 MBP02144 154 aa17.5■□□□□ 0.39
SDF2L1-201ENST00000248958 UBE2L3P68036 154 aaKnown RBP17.5■□□□□ 0.39
SDF2L1-201ENST00000248958 ICAM4Q14773 271 aa17.5■□□□□ 0.39
SDF2L1-201ENST00000248958 PQLC2Q6ZP29 291 aa17.5■□□□□ 0.39
SDF2L1-201ENST00000248958 EXOC3-AS1Q8N2X6 119 aa17.5■□□□□ 0.39
SDF2L1-201ENST00000248958 TRAV12-2A0A075B6T6 113 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 G3V3Q6 166 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 SPART-AS1P0CW21 52 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 ATP6V0CP27449 155 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 RPP25LQ8N5L8 163 aaKnown RBP17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 OR10G4Q8NGN3 311 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 OR10G9Q8NGN4 311 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 OR10G7Q8NGN6 311 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 ZNF503Q96F45 646 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 LINC00477Q96M19 166 aa17.49■□□□□ 0.39
SDF2L1-201ENST00000248958 LOC102723971A0A1B0GUV8 181 aa17.48■□□□□ 0.39
SDF2L1-201ENST00000248958 TAAR5O14804 337 aa17.48■□□□□ 0.39
SDF2L1-201ENST00000248958 PRB4P10163 310 aaPredicted RBP17.48■□□□□ 0.39
SDF2L1-201ENST00000248958 LEPP41159 167 aa17.48■□□□□ 0.39
SDF2L1-201ENST00000248958 GNPNAT1Q96EK6 184 aaPredicted RBP17.48■□□□□ 0.39
SDF2L1-201ENST00000248958 RAB2AP61019 212 aa17.47■□□□□ 0.39
SDF2L1-201ENST00000248958 FAM122CQ6P4D5 195 aa17.47■□□□□ 0.39
SDF2L1-201ENST00000248958 C2CD4CQ8TF44 421 aa17.47■□□□□ 0.39
SDF2L1-201ENST00000248958 LINC01587Q99440 93 aa17.47■□□□□ 0.39
SDF2L1-201ENST00000248958 CELA1Q9UNI1 258 aa17.47■□□□□ 0.39
SDF2L1-201ENST00000248958 TRAV10A0A0B4J240 114 aa17.46■□□□□ 0.39
SDF2L1-201ENST00000248958 CT45A10P0DMU9 189 aa17.46■□□□□ 0.39
SDF2L1-201ENST00000248958 CSN1S1P47710 185 aa17.46■□□□□ 0.39
SDF2L1-201ENST00000248958 TCTAP57738 103 aa17.46■□□□□ 0.39
SDF2L1-201ENST00000248958 TAS2R60P59551 318 aa17.46■□□□□ 0.39
SDF2L1-201ENST00000248958 PHYHIPLQ96FC7 376 aa17.46■□□□□ 0.39
SDF2L1-201ENST00000248958 ARPC5O15511 151 aa17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 CDC34P49427 236 aaPredicted RBP17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 EMP1P54849 157 aa17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 RANP62826 216 aaKnown RBP17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 C12orf74Q32Q52 190 aa17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 RPL7L1Q6DKI1 246 aaKnown RBP17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 C9orf47Q6ZRZ4 202 aa17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 Q6ZTC4 211 aa17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 DYNC2H1Q8NCM8 4307 aaKnown RBP17.45■□□□□ 0.38
SDF2L1-201ENST00000248958 H7BYZ3 331 aa17.44■□□□□ 0.38
SDF2L1-201ENST00000248958 Q9H3A6 140 aa17.44■□□□□ 0.38
SDF2L1-201ENST00000248958 DKK2Q9UBU2 259 aa17.44■□□□□ 0.38
SDF2L1-201ENST00000248958 YTHDF2Q9Y5A9 579 aaKnown RBP17.44■□□□□ 0.38
SDF2L1-201ENST00000248958 ZNF705GA8MUZ8 300 aaPredicted RBP17.43■□□□□ 0.38
SDF2L1-201ENST00000248958 FAM74A1Q5RGS3 127 aa17.43■□□□□ 0.38
SDF2L1-201ENST00000248958 TMEM78Q5T7P6 136 aa17.43■□□□□ 0.38
SDF2L1-201ENST00000248958 RXFP4Q8TDU9 374 aa17.43■□□□□ 0.38
SDF2L1-201ENST00000248958 STAG3L2P0CL84 134 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 STAG3L3P0CL85 134 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 ERCC8Q13216 396 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 FAM222AQ5U5X8 452 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 GFI1BQ5VTD9 330 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 NIPSNAP3BQ9BS92 247 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 AGPAT4-IT1Q9H0P7 198 aa17.42■□□□□ 0.38
SDF2L1-201ENST00000248958 TENM2Q9NT68 2774 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 RBAKDNA6NC62 111 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 SLC25A5P05141 298 aaKnown RBP17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 NMBP08949 121 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 ZNF345Q14585 488 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 ARL6IP6Q8N6S5 226 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 FAM19A4Q96LR4 140 aa17.41■□□□□ 0.38
SDF2L1-201ENST00000248958 ACTR3CQ9C0K3 210 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms