RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 HSBP1O75506 76 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 IGF1P05019 195 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
DDX49-201ENST00000247003 C19orf54Q5BKX5 351 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 C8orf49Q96NF6 230 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 ALKBH7Q9BT30 221 aaPredicted RBP11.72□□□□□ -0.53
DDX49-201ENST00000247003 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
DDX49-201ENST00000247003 H3BUA1 57 aa11.71□□□□□ -0.54
DDX49-201ENST00000247003 PAX1P15863 534 aa11.71□□□□□ -0.54
DDX49-201ENST00000247003 ASCL2Q99929 193 aa11.71□□□□□ -0.54
DDX49-201ENST00000247003 LINC00527Q9UJ94 153 aa11.71□□□□□ -0.54
DDX49-201ENST00000247003 AKAP6Q13023 2319 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 UBR5O95071 2799 aaPredicted RBP11.7□□□□□ -0.54
DDX49-201ENST00000247003 TMEM189A5PLL7 270 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 A6NDX4 124 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 PRB4P10163 310 aaPredicted RBP11.7□□□□□ -0.54
DDX49-201ENST00000247003 BMI1P35226 326 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 ARL3P36405 182 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 KRTDAPP60985 99 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 Q71RC1 249 aaPredicted RBP11.7□□□□□ -0.54
DDX49-201ENST00000247003 NRN1Q9NPD7 142 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 IGHG2P01859 326 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 NTF3P20783 257 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 LCN12Q6JVE5 192 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 RNASEKQ6P5S7 137 aaKnown RBP11.7□□□□□ -0.54
DDX49-201ENST00000247003 PRR25Q96S07 402 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 TPPP3Q9BW30 176 aa11.7□□□□□ -0.54
DDX49-201ENST00000247003 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
DDX49-201ENST00000247003 IGHV3-66A0A0C4DH42 116 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 SH2D1AO60880 128 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 COX8CQ7Z4L0 72 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 LINC01356Q8N9X3 169 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 NRGNQ92686 78 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 USMG5Q96IX5 58 aa11.69□□□□□ -0.54
DDX49-201ENST00000247003 DOPEY1Q5JWR5 2465 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 CLPSL1A2RUU4 121 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 RBAKDNA6NC62 111 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 CRIP1P50238 77 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 RPS20P60866 119 aaKnown RBP11.68□□□□□ -0.54
DDX49-201ENST00000247003 IGFL4Q6B9Z1 124 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
DDX49-201ENST00000247003 LOC102724200A0A096LPH7 203 aaPredicted RBP11.67□□□□□ -0.54
DDX49-201ENST00000247003 BRI3O95415 125 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
DDX49-201ENST00000247003 ARMS2P0C7Q2 107 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 Q8TAT8 98 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 M0R2Z0 102 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 ZNF207O43670 478 aaKnown RBP11.67□□□□□ -0.54
DDX49-201ENST00000247003 FAM19A2Q8N3H0 131 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
DDX49-201ENST00000247003 VGLL1Q99990 258 aa11.67□□□□□ -0.54
DDX49-201ENST00000247003 IGHV3OR16-13A0A075B7E8 117 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 IGHV3-74A0A0B4J1X5 117 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 PF4V1P10720 104 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 CD33P20138 364 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 TEX43Q6ZNM6 134 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 REC114Q7Z4M0 266 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 VAMP8Q9BV40 100 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 CLEC5AQ9NY25 188 aa11.66□□□□□ -0.54
DDX49-201ENST00000247003 TMSB15BA0A087X1C1 80 aa11.65□□□□□ -0.54
DDX49-201ENST00000247003 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
DDX49-201ENST00000247003 J3QLI3 93 aa11.65□□□□□ -0.54
DDX49-201ENST00000247003 NDUFA4O00483 81 aa11.65□□□□□ -0.54
DDX49-201ENST00000247003 USP9XQ93008 2570 aaPredicted RBP11.65□□□□□ -0.54
DDX49-201ENST00000247003 A0A0G2JLM5 398 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 KIR2DL5BA0A0G2JN68 375 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 KIR2DL5BA0A0G2JPC4 375 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 A1L4Q6 167 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 IGHG4P01861 327 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 PPIFP30405 207 aaKnown RBP11.65□□□□□ -0.55
DDX49-201ENST00000247003 C8orf86Q6ZUL3 223 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 NIT1Q86X76 327 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 KIR2DL5AQ8N109 375 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 RNF182Q8N6D2 247 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 GATD1Q8NB37 220 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 CHCHD1Q96BP2 118 aaKnown RBP11.65□□□□□ -0.55
DDX49-201ENST00000247003 C14orf144Q96I85 54 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 U3KQE9 123 aa11.65□□□□□ -0.55
DDX49-201ENST00000247003 CSMD1Q96PZ7 3565 aa11.64□□□□□ -0.55
DDX49-201ENST00000247003 RAB4AP20338 218 aa11.64□□□□□ -0.55
DDX49-201ENST00000247003 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
DDX49-201ENST00000247003 TMEM78Q5T7P6 136 aa11.64□□□□□ -0.55
DDX49-201ENST00000247003 NDUFAF3Q9BU61 184 aa11.64□□□□□ -0.55
DDX49-201ENST00000247003 FABP5P3A8MUU1 101 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 AVPP01185 164 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 PRR31Q5SQ13 230 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 LYZL1Q6UWQ5 148 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 C9orf139Q6ZV77 190 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 C16orf92Q96LL3 132 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 BLCAPP62952 87 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 FER1L6-AS1Q8NA97 138 aa11.63□□□□□ -0.55
DDX49-201ENST00000247003 ASH1LQ9NR48 2969 aaKnown RBP11.62□□□□□ -0.55
DDX49-201ENST00000247003 FAM181BA6NEQ2 426 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms