RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 S100A7P31151 101 aa9.43□□□□□ -0.9
SEC61A1-201ENST00000243253 ZNF738Q8NE65 137 aa9.43□□□□□ -0.9
SEC61A1-201ENST00000243253 RBPJQ06330 500 aa9.43□□□□□ -0.9
SEC61A1-201ENST00000243253 ZNF462Q96JM2 2506 aa9.43□□□□□ -0.9
SEC61A1-201ENST00000243253 CDSNQ15517 529 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 SIGLEC15Q6ZMC9 328 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 ZNF493Q6ZR52 646 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 TMEM75Q8N9X5 138 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 ZNF414Q96IQ9 312 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 TMEM133Q9H2Q1 129 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 U3KQK5 164 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 NACAE9PAV3 2078 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 NCR2O95944 276 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 FCGR2BP31994 310 aaPredicted RBP9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 FBLN7Q53RD9 439 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 SHISA9B4DS77 424 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 CDKN1BP46527 198 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 ECSCRQ19T08 205 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 COX8CQ7Z4L0 72 aa9.42□□□□□ -0.9
SEC61A1-201ENST00000243253 TRBV19A0A075B6N1 114 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 TIMM23O14925 209 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 LEPROTL1O95214 131 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 COL8A1P27658 744 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 PET117Q6UWS5 81 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 JMJD1CQ15652 2540 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 HSBP1L1C9JCN9 74 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 K7EIM0 57 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 OR5AL1P0C617 328 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 FAM106CPP0CH98 169 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 FAM106AQ4KMX7 169 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 BCL6BQ8N143 479 aaPredicted RBP9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 IGHV1-3A0A0C4DH29 117 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 ARMS2P0C7Q2 107 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 PPIFP30405 207 aaKnown RBP9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 FAM162BQ5T6X4 162 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 TNFRSF14Q92956 283 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 ZNF747Q9BV97 191 aa9.41□□□□□ -0.9
SEC61A1-201ENST00000243253 TRAV30A0A087WSZ9 112 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 H3BRN7 92 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 IL4P05112 153 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 RASL11BQ9BPW5 248 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 NGBQ9NPG2 151 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 F8W735 103 aaPredicted RBP9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 BUB1B-PAK6H3BSN5 160 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 LIPFP07098 398 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 RPS20P60866 119 aaKnown RBP9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 PPP1R27Q86WC6 154 aa9.4□□□□□ -0.9
SEC61A1-201ENST00000243253 UQCRFS1P47985 274 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 Q8NA96 180 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 SHANK2-AS3Q9BTD1 123 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 UBTD1Q9HAC8 227 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 HIGD1AQ9Y241 93 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 CELSR2Q9HCU4 2923 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 WI2-2373I1.2A0A1W2PRP0 233 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 LOXL1Q08397 574 aaPredicted RBP9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 SRSF12Q8WXF0 261 aaKnown RBP9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 MS4A6AQ9H2W1 248 aa9.39□□□□□ -0.91
SEC61A1-201ENST00000243253 PCP4P48539 62 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 ZNF491Q8N8L2 437 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 Q8TAT8 98 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 AP1S3Q96PC3 154 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 SPRY2O43597 315 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 GNG7O60262 68 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 HTR1DP28221 377 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 NAA38Q9BRA0 125 aaKnown RBP9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 VPS25Q9BRG1 176 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 CFAP46Q8IYW2 2715 aa9.38□□□□□ -0.91
SEC61A1-201ENST00000243253 LINC01546A6NGU7 62 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 OR2T8A6NH00 312 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 COX8AP10176 69 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 RPL11P62913 178 aaKnown RBP9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 PSG3Q16557 428 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 OR4C5Q8NGB2 326 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 IGHG4P01861 327 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 OR8A1Q8NGG7 326 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 A0A1B0GUT8 65 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 NUDT3O95989 172 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 PPBPP02775 128 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 APOBEC3AP31941 199 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 ZNF672Q499Z4 452 aaPredicted RBP9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 LYPD1Q8N2G4 141 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 DPF1Q92782 380 aa9.37□□□□□ -0.91
SEC61A1-201ENST00000243253 FBLL1A6NHQ2 334 aaKnown RBP9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 SRSF8Q9BRL6 282 aaKnown RBP9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 CFHR4Q92496 578 aa9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 NPFFR1Q9GZQ6 430 aa9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 TMEM219Q86XT9 240 aa9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 C8orf49Q96NF6 230 aa9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
SEC61A1-201ENST00000243253 A0A087X0K7 114 aa9.35□□□□□ -0.91
SEC61A1-201ENST00000243253 HLA-DMBP28068 263 aa9.35□□□□□ -0.91
SEC61A1-201ENST00000243253 TM4SF20Q53R12 229 aa9.35□□□□□ -0.91
SEC61A1-201ENST00000243253 TMEM191AQ9H0A3 160 aa9.35□□□□□ -0.91
SEC61A1-201ENST00000243253 HIVEP2P31629 2446 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms