RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 J3QKU1 62 aa17.9■□□□□ 0.46
MSX2-201ENST00000239243 Q6YL49 198 aa17.9■□□□□ 0.46
MSX2-201ENST00000239243 RBPMS2Q6ZRY4 209 aaKnown RBP17.9■□□□□ 0.46
MSX2-201ENST00000239243 COX8CQ7Z4L0 72 aa17.9■□□□□ 0.46
MSX2-201ENST00000239243 PLA2G2AP14555 144 aa17.89■□□□□ 0.45
MSX2-201ENST00000239243 LCN12Q6JVE5 192 aa17.89■□□□□ 0.45
MSX2-201ENST00000239243 TCF24Q7RTU0 167 aa17.89■□□□□ 0.45
MSX2-201ENST00000239243 OR4X2Q8NGF9 303 aa17.89■□□□□ 0.45
MSX2-201ENST00000239243 NIT2Q9NQR4 276 aa17.89■□□□□ 0.45
MSX2-201ENST00000239243 NAV2Q8IVL1 2488 aa17.89■□□□□ 0.45
MSX2-201ENST00000239243 IGKV2-40A0A087WW87 121 aaPredicted RBP17.88■□□□□ 0.45
MSX2-201ENST00000239243 IGHV3-66A0A0C4DH42 116 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 TMEM89A2RUT3 159 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 ZNF207O43670 478 aaKnown RBP17.88■□□□□ 0.45
MSX2-201ENST00000239243 IGKV2D-40P01614 121 aaPredicted RBP17.88■□□□□ 0.45
MSX2-201ENST00000239243 APCSP02743 223 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 APOHP02749 345 aaPredicted RBP17.88■□□□□ 0.45
MSX2-201ENST00000239243 Q0VG73 95 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 CLEC5AQ9NY25 188 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 PRRC2AP48634 2157 aaKnown RBP17.88■□□□□ 0.45
MSX2-201ENST00000239243 GRIFINA4D1Z8 144 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 IGHG4P01861 327 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 PYY3Q5JQD4 70 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 KRTAP1-3Q8IUG1 177 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 GTSF1Q8WW33 167 aa17.88■□□□□ 0.45
MSX2-201ENST00000239243 MAP1AP78559 2803 aaPredicted RBP17.88■□□□□ 0.45
MSX2-201ENST00000239243 A0A1B0GXF2 115 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 RBAKDNA6NC62 111 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 TRBV12-3P01733 135 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 IGHV3-11P01762 117 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 MRPL53Q96EL3 112 aaKnown RBP17.87■□□□□ 0.45
MSX2-201ENST00000239243 CSPG4Q6UVK1 2322 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 HBBP68871 147 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 CELSR1Q9NYQ6 3014 aa17.87■□□□□ 0.45
MSX2-201ENST00000239243 IGHV3OR16-13A0A075B7E8 117 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 IGHV3-74A0A0B4J1X5 117 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 FOXA3P55318 350 aaPredicted RBP17.86■□□□□ 0.45
MSX2-201ENST00000239243 OR10J3Q5JRS4 329 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 PRR25Q96S07 402 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 NDFIP1Q9BT67 221 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 CENPEQ02224 2701 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 PCP4L1A6NKN8 68 aa17.86■□□□□ 0.45
MSX2-201ENST00000239243 IGHV3-49A0A0A0MS15 119 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 A0A1W2PS18 150 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 PSMB8P28062 276 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 IGFL4Q6B9Z1 124 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 GLMPQ8WWB7 406 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 C8orf49Q96NF6 230 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 NPFFR1Q9GZQ6 430 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 PRDM13Q9H4Q3 707 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 CSMD2Q7Z408 3487 aa17.85■□□□□ 0.45
MSX2-201ENST00000239243 HLA-DMBP28068 263 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 S100A12P80511 92 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 Q6AWC8 147 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 C8orf86Q6ZUL3 223 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 Q71RC1 249 aaPredicted RBP17.84■□□□□ 0.45
MSX2-201ENST00000239243 BAGE3Q86Y29 109 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 TMEM256Q8N2U0 113 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 TEX29Q8N6K0 151 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 PGLYRP4Q96LB8 373 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 ESDP10768 282 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 CRIP1P50238 77 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 DNLZQ5SXM8 178 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 FAM162BQ5T6X4 162 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 UNQ9165/PRO28630Q6UXU0 137 aa17.84■□□□□ 0.45
MSX2-201ENST00000239243 ZNF705FA8MVS1 300 aaPredicted RBP17.83■□□□□ 0.45
MSX2-201ENST00000239243 CAMPP49913 170 aa17.83■□□□□ 0.45
MSX2-201ENST00000239243 TMEM95Q3KNT9 176 aa17.83■□□□□ 0.45
MSX2-201ENST00000239243 SLAQ13239 276 aa17.83■□□□□ 0.44
MSX2-201ENST00000239243 ABCA12Q86UK0 2595 aa17.83■□□□□ 0.44
MSX2-201ENST00000239243 PSMG3-AS1Q96PY0 264 aa17.83■□□□□ 0.44
MSX2-201ENST00000239243 ASCL2Q99929 193 aa17.83■□□□□ 0.44
MSX2-201ENST00000239243 VGLL1Q99990 258 aa17.83■□□□□ 0.44
MSX2-201ENST00000239243 PEF1Q9UBV8 284 aaKnown RBP17.83■□□□□ 0.44
MSX2-201ENST00000239243 PRB4P10163 310 aaPredicted RBP17.82■□□□□ 0.44
MSX2-201ENST00000239243 BMI1P35226 326 aa17.82■□□□□ 0.44
MSX2-201ENST00000239243 TP53TG3Q9ULZ0 132 aa17.82■□□□□ 0.44
MSX2-201ENST00000239243 A0A1B0GUS0 222 aa17.82■□□□□ 0.44
MSX2-201ENST00000239243 A8MWP6 167 aa17.82■□□□□ 0.44
MSX2-201ENST00000239243 SRIP30626 198 aa17.82■□□□□ 0.44
MSX2-201ENST00000239243 KIAA1644Q3SXP7 199 aa17.82■□□□□ 0.44
MSX2-201ENST00000239243 PAFAH1B2P68402 229 aa17.81■□□□□ 0.44
MSX2-201ENST00000239243 GDF5OSQ5U4N7 250 aa17.81■□□□□ 0.44
MSX2-201ENST00000239243 LCNL1Q6ZST4 164 aa17.81■□□□□ 0.44
MSX2-201ENST00000239243 RNF182Q8N6D2 247 aa17.81■□□□□ 0.44
MSX2-201ENST00000239243 TRAV8-2A0A0B4J237 113 aa17.8■□□□□ 0.44
MSX2-201ENST00000239243 HAX1O00165 279 aa17.8■□□□□ 0.44
MSX2-201ENST00000239243 HOXA3O43365 443 aaPredicted RBP17.8■□□□□ 0.44
MSX2-201ENST00000239243 SH2D1AO60880 128 aa17.8■□□□□ 0.44
MSX2-201ENST00000239243 GZMBP10144 247 aa17.8■□□□□ 0.44
MSX2-201ENST00000239243 Q8TAT8 98 aa17.8■□□□□ 0.44
MSX2-201ENST00000239243 ZFHX3Q15911 3703 aa17.8■□□□□ 0.44
MSX2-201ENST00000239243 SERF1AO75920 110 aa17.79■□□□□ 0.44
MSX2-201ENST00000239243 JOSD1Q15040 202 aaPredicted RBP17.79■□□□□ 0.44
MSX2-201ENST00000239243 C16orf92Q96LL3 132 aa17.79■□□□□ 0.44
MSX2-201ENST00000239243 KMT2BQ9UMN6 2715 aaPredicted RBP17.79■□□□□ 0.44
MSX2-201ENST00000239243 A0A1B0GW15 77 aa17.79■□□□□ 0.44
MSX2-201ENST00000239243 TMEM189A5PLL7 270 aa17.79■□□□□ 0.44
MSX2-201ENST00000239243 FAM106AQ4KMX7 169 aa17.79■□□□□ 0.44
MSX2-201ENST00000239243 DAZ1Q9NQZ3 744 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms