RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 ICOSQ9Y6W8 199 aa5.65□□□□□ -1.5
IFT43-201ENST00000238628 TRGV1A0A0A0MS02 117 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 ANKRD20A5PA0PJZ0 165 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 H3BP45 60 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 CTDSPLO15194 276 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 MRPS12O15235 138 aaKnown RBP5.64□□□□□ -1.51
IFT43-201ENST00000238628 PAX4O43316 350 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 ZNF324O75467 553 aaPredicted RBP5.64□□□□□ -1.51
IFT43-201ENST00000238628 CXCL2P19875 107 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 SELENOTP62341 195 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 LCN15Q6UWW0 184 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 PATE2Q6UY27 113 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 LINC00528Q8N1L1 170 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 ZNF431Q8TF32 576 aaPredicted RBP5.64□□□□□ -1.51
IFT43-201ENST00000238628 DIRAS2Q96HU8 199 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 PYGO2Q9BRQ0 406 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 SLC50A1Q9BRV3 221 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 NAA50Q9GZZ1 169 aaKnown RBP5.64□□□□□ -1.51
IFT43-201ENST00000238628 ARV1Q9H2C2 271 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 ZNF331Q9NQX6 463 aaPredicted RBP5.64□□□□□ -1.51
IFT43-201ENST00000238628 GSN-AS1Q9NRJ2 163 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 RABL2AQ9UBK7 228 aaPredicted RBP5.64□□□□□ -1.51
IFT43-201ENST00000238628 RABL2BQ9UNT1 228 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 FUT9Q9Y231 359 aa5.64□□□□□ -1.51
IFT43-201ENST00000238628 GAS8-AS1O95177 125 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 HOXB5P09067 269 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 CT45A10P0DMU9 189 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 LEPP41159 167 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 CTF1Q16619 201 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 TMEM128Q5BJH2 165 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 LRTM2Q8N967 370 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 KRTAP4-12Q9BQ66 201 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 NPVFQ9HCQ7 196 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 PSENENQ9NZ42 101 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 MSRB1Q9NZV6 116 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 LY96Q9Y6Y9 160 aa5.63□□□□□ -1.51
IFT43-201ENST00000238628 IGLV5-52A0A0A0MRZ9 124 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 NPIPB6E9PJ23 425 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 H3BTX0 84 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 PRAF2O60831 178 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 EVI2AP22794 236 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 VAMP1P23763 118 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 RRAS2P62070 204 aaPredicted RBP5.62□□□□□ -1.51
IFT43-201ENST00000238628 SLAQ13239 276 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 MRPL23Q16540 153 aaKnown RBP5.62□□□□□ -1.51
IFT43-201ENST00000238628 PXDC1Q5TGL8 231 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 NEGR1Q7Z3B1 354 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 LINC00305Q7Z4B0 112 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 BPIFA4PQ86YQ2 179 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 ZBTB8BQ8NAP8 495 aaPredicted RBP5.62□□□□□ -1.51
IFT43-201ENST00000238628 C11orf72Q8NBR9 251 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 ZNF680Q8NEM1 530 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 ODF3Q96PU9 254 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 HHLA3Q9XRX5 114 aa5.62□□□□□ -1.51
IFT43-201ENST00000238628 LINC00854A0A1B0GVQ3 168 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 K7EP13 123 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 SLC17A3O00476 420 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 GOSR2O14653 212 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 SPINK4O60575 86 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 SFT2D2O95562 160 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 IGHV3-53P01767 116 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 SLC25A5P05141 298 aaKnown RBP5.61□□□□□ -1.51
IFT43-201ENST00000238628 CRYBA4P53673 196 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 POLR2GP62487 172 aaKnown RBP eCLIP5.61□□□□□ -1.51
IFT43-201ENST00000238628 ID3Q02535 119 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 SLC38A11Q08AI6 406 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 TEPPQ6URK8 271 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 EIF4E3Q8N5X7 224 aaKnown RBP5.61□□□□□ -1.51
IFT43-201ENST00000238628 ST6GAL2Q96JF0 529 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 C8orf49Q96NF6 230 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 LINC00467Q9BRT7 94 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 RSL24D1Q9UHA3 163 aaKnown RBP5.61□□□□□ -1.51
IFT43-201ENST00000238628 PRO0255Q9UI72 69 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 KLF12Q9Y4X4 402 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 PXMP4Q9Y6I8 212 aa5.61□□□□□ -1.51
IFT43-201ENST00000238628 C7orf71A4D174 169 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 PSCAO43653 123 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 CCNKO75909 580 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 FAUP35544 74 aaKnown RBP5.6□□□□□ -1.51
IFT43-201ENST00000238628 FHL2Q14192 279 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 ANXA2RQ3ZCQ2 193 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 C4orf46Q504U0 113 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 WFDC10BQ8IUB3 73 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 OR10P1Q8NGE3 313 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 SAT2Q96F10 170 aaPredicted RBP5.6□□□□□ -1.51
IFT43-201ENST00000238628 SMIM8Q96KF7 97 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 CCDC59Q9P031 241 aaKnown RBP5.6□□□□□ -1.51
IFT43-201ENST00000238628 MGAT4CQ9UBM8 478 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 FAT3Q8TDW7 4589 aa5.6□□□□□ -1.51
IFT43-201ENST00000238628 E5RGE8 158 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 FNDC10F2Z333 226 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 H3BQ15 152 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 K7EPK0 472 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 AGPAT2O15120 278 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 COX7A2P2O60397 106 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 MPDU1O75352 247 aa5.59□□□□□ -1.51
IFT43-201ENST00000238628 METTL15P1P0C7V9 234 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms