RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 NMUP48645 174 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 SRSF8Q9BRL6 282 aaKnown RBP12.16□□□□□ -0.46
DDX55-201ENST00000238146 AAMDCQ9H7C9 122 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 DYNLRB1Q9NP97 96 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 DKK2Q9UBU2 259 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 RALYQ9UKM9 306 aaKnown RBP12.16□□□□□ -0.46
DDX55-201ENST00000238146 CNOT1A5YKK6 2376 aaKnown RBP12.16□□□□□ -0.46
DDX55-201ENST00000238146 TPRP12270 2363 aaKnown RBP12.16□□□□□ -0.46
DDX55-201ENST00000238146 G3V4G9 280 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 CKS2P33552 79 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 PDE6HQ13956 83 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 COL25A1Q9BXS0 654 aaPredicted RBP12.16□□□□□ -0.46
DDX55-201ENST00000238146 ZGRF1Q86YA3 2104 aa12.16□□□□□ -0.46
DDX55-201ENST00000238146 EP300Q09472 2414 aaPredicted RBP12.16□□□□□ -0.46
DDX55-201ENST00000238146 KLF17Q5JT82 389 aaPredicted RBP12.15□□□□□ -0.46
DDX55-201ENST00000238146 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
DDX55-201ENST00000238146 A0A1W2PRD5 423 aa12.15□□□□□ -0.46
DDX55-201ENST00000238146 A0A1W2PRF3 423 aa12.15□□□□□ -0.46
DDX55-201ENST00000238146 A0A1W2PRM7 423 aa12.15□□□□□ -0.46
DDX55-201ENST00000238146 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.46
DDX55-201ENST00000238146 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
DDX55-201ENST00000238146 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
DDX55-201ENST00000238146 NEGR1Q7Z3B1 354 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 RNF5Q99942 180 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 A0A1W2PPM0 123 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 TWIST1Q15672 202 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 COX8CQ7Z4L0 72 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 VSTM5A8MXK1 200 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 LY6LH3BQJ8 138 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 PRR25Q96S07 402 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 JKAMPQ9P055 326 aa12.14□□□□□ -0.47
DDX55-201ENST00000238146 CACNA1HO95180 2353 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 E7EQL1 145 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 GFRALQ6UXV0 394 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 SPCS1Q9Y6A9 102 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 TIMM23O14925 209 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 GNG7O60262 68 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 ZNF80P51504 273 aaPredicted RBP12.13□□□□□ -0.47
DDX55-201ENST00000238146 ZNF575Q86XF7 245 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
DDX55-201ENST00000238146 TM4SF20Q53R12 229 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 NPIPB5A8MRT5 1133 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 SHISA9B4DS77 424 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 LYNX1G3V0Z9 82 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 IGLC6P0CF74 106 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 LYNX1P0DP58 116 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 OR5A1Q8NGJ0 315 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 Q8TAT8 98 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 RAB1BQ9H0U4 201 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 MSRB1Q9NZV6 116 aa12.12□□□□□ -0.47
DDX55-201ENST00000238146 TACC2O95359 2948 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 PPIAL4CA0A0B4J2A2 164 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 TMEM238C9JI98 176 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 PPIAL4GP0DN37 164 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 PIFOQ8TCI5 191 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 IGKV2D-26A0A0A0MRZ7 120 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 GAS8-AS1O95177 125 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 S100A7AQ86SG5 101 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 RNF185Q96GF1 192 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 ZNF318Q5VUA4 2279 aa12.11□□□□□ -0.47
DDX55-201ENST00000238146 FANCD2OSQ96PS1 177 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 VGLL1Q99990 258 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 SH3BGRL2Q9UJC5 107 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 F8W735 103 aaPredicted RBP12.1□□□□□ -0.47
DDX55-201ENST00000238146 NBR2O15453 112 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 TTTY13Q9BZ97 58 aa12.1□□□□□ -0.47
DDX55-201ENST00000238146 FABP2P12104 132 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 FXYD2P54710 66 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 ODF1Q14990 250 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 ZMAT4Q9H898 229 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 DMXL1Q9Y485 3027 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 FBLL1A6NHQ2 334 aaKnown RBP12.09□□□□□ -0.47
DDX55-201ENST00000238146 PRRG2O14669 202 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 SMIM13P0DJ93 91 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 BMI1P35226 326 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 LEPP41159 167 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 MFAP4P55083 255 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 SAMD5Q5TGI4 173 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 IGFL4Q6B9Z1 124 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 OTOGLQ3ZCN5 2332 aa12.09□□□□□ -0.47
DDX55-201ENST00000238146 IGLV11-55A0A075B6I3 123 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 LINC01546A6NGU7 62 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 IGHG4P01861 327 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 GCSHP23434 173 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 CEACAM3P40198 252 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 IGF2-ASQ6U949 168 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 PSMG3-AS1Q96PY0 264 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 RPL7P18124 248 aaKnown RBP12.08□□□□□ -0.48
DDX55-201ENST00000238146 HIGD1BQ9P298 99 aa12.08□□□□□ -0.48
DDX55-201ENST00000238146 HLA-DMBP28068 263 aa12.07□□□□□ -0.48
DDX55-201ENST00000238146 FCER1GP30273 86 aa12.07□□□□□ -0.48
DDX55-201ENST00000238146 CFHR4Q92496 578 aa12.07□□□□□ -0.48
DDX55-201ENST00000238146 ZNF48Q96MX3 618 aaPredicted RBP12.07□□□□□ -0.48
DDX55-201ENST00000238146 CNFNQ9BYD5 112 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms