RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 RLFQ13129 1914 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 TRAV26-1A0A087WT03 109 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 B4DSR2 109 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 ZNF672Q499Z4 452 aaPredicted RBP9.12□□□□□ -0.95
MSH6-201ENST00000234420 IGLC2P0DOY2 106 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 IGLC3P0DOY3 106 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 SS18Q15532 418 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 LIMS2Q7Z4I7 341 aa9.12□□□□□ -0.95
MSH6-201ENST00000234420 NTN5Q8WTR8 489 aaPredicted RBP9.11□□□□□ -0.95
MSH6-201ENST00000234420 LINC01465Q8N7H1 131 aa9.11□□□□□ -0.95
MSH6-201ENST00000234420 RNF125Q96EQ8 232 aa9.11□□□□□ -0.95
MSH6-201ENST00000234420 TNRC6AQ8NDV7 1962 aaKnown RBP9.11□□□□□ -0.95
MSH6-201ENST00000234420 USF3Q68DE3 2245 aa9.11□□□□□ -0.95
MSH6-201ENST00000234420 SPATA31B1PQ5VZV4 182 aa9.11□□□□□ -0.95
MSH6-201ENST00000234420 MRPL14Q6P1L8 145 aaKnown RBP9.11□□□□□ -0.95
MSH6-201ENST00000234420 KIAA1549Q9HCM3 1950 aa9.11□□□□□ -0.95
MSH6-201ENST00000234420 A0A087WWL8 130 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 IGHG2P01859 326 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 C1orf53Q5VUE5 145 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 ESM1Q9NQ30 184 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 ACACAQ13085 2346 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 FNDC10F2Z333 226 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 APOC4P55056 127 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 C15orf32Q32M92 178 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 SH2D6Q7Z4S9 175 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 TEX48A0A1B0GUV7 120 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 OR11H6Q8NGC7 330 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 A0A1B0GX51 115 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 VCYO14598 125 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 RNF166Q96A37 237 aaPredicted RBP9.1□□□□□ -0.95
MSH6-201ENST00000234420 ADAMTSL3P82987 1691 aa9.1□□□□□ -0.95
MSH6-201ENST00000234420 A0A0G2JK05 382 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 CRLF1O75462 422 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 DUSP14O95147 198 aaKnown RBP9.09□□□□□ -0.95
MSH6-201ENST00000234420 CEND1Q8N111 149 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 DSCAML1Q8TD84 2053 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 FOXG1P55316 489 aaPredicted RBP9.09□□□□□ -0.95
MSH6-201ENST00000234420 C14orf178Q8N769 122 aaPredicted RBP9.09□□□□□ -0.95
MSH6-201ENST00000234420 KIAA1551Q9HCM1 1747 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 NLRC5Q86WI3 1866 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 TAL2Q16559 108 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 PFN2P35080 140 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 NHSL1Q5SYE7 1610 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 PMS2P5A8MQ11 134 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 SHISA9B4DS77 424 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 IL18BPO95998 194 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.09□□□□□ -0.95
MSH6-201ENST00000234420 IGKV1D-13A0A0B4J2D9 117 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 IGKV1-13P0DP09 117 aa9.09□□□□□ -0.95
MSH6-201ENST00000234420 IGHV3-38A0A0C4DH36 116 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 Q6ZQT7 251 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 FAM236AA0A1B0GUQ0 79 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 FAM236BA0A1B0GV22 79 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 SRRM4A7MD48 611 aaKnown RBP9.08□□□□□ -0.96
MSH6-201ENST00000234420 TM2D1Q9BX74 207 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 LINC01590Q5TEZ4 76 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 AGMATQ9BSE5 352 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 LCTP09848 1927 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 NRXN2Q9P2S2 1712 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 IGLL1P15814 213 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 DEFB131AP59861 70 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 SRSF2Q01130 221 aaKnown RBP9.08□□□□□ -0.96
MSH6-201ENST00000234420 PRO1854Q9UHT4 67 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 TRGV11A0A075B6L2 103 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 PRSS29PA6NIE9 313 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 NRGNQ92686 78 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 HGFACQ04756 655 aa9.08□□□□□ -0.96
MSH6-201ENST00000234420 NCOA6Q14686 2063 aaPredicted RBP9.08□□□□□ -0.96
MSH6-201ENST00000234420 ADCYAP1P18509 176 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 FAM104BQ5XKR9 115 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 NEGR1Q7Z3B1 354 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 E9PLN8 166 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
MSH6-201ENST00000234420 KLK9Q9UKQ9 250 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 SH2D1AO60880 128 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 CR1LQ2VPA4 569 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 Q8NFD4 153 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 IGKV3D-7A0A0C4DH55 119 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 DKK1O94907 266 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 Q6ZWC4 215 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 LY6G5BQ8NDX9 201 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 C15orf61A6NNL5 157 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 IGKV1D-12P01611 117 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 MPLKIPQ8TAP9 179 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 CYTL1Q9NRR1 136 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 WNK1Q9H4A3 2382 aa9.07□□□□□ -0.96
MSH6-201ENST00000234420 PKDREJQ9NTG1 2253 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 SAA2-SAA4A0A096LPE2 208 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 IGHV4-28A0A0C4DH34 117 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 ANGP03950 147 aaKnown RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 SAA2P0DJI9 122 aaPredicted RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 IGFBP3P17936 291 aaPredicted RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 ZFP36P26651 326 aaKnown RBP9.06□□□□□ -0.96
MSH6-201ENST00000234420 MED13LQ71F56 2210 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 IGHV1-18A0A0C4DH31 117 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 COX8AP10176 69 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 PSG7Q13046 419 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 Q8TAT8 98 aa9.06□□□□□ -0.96
MSH6-201ENST00000234420 NXPH4O95158 308 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms