RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CD7P09564 240 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 CCL3P10147 92 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 GP9P14770 177 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 PRR7Q8TB68 274 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 H3BTX0 84 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 LGALS1P09382 135 aaKnown RBP10.26□□□□□ -0.77
MSH2-201ENST00000233146 CRIP1P50238 77 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 NGBQ9NPG2 151 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 ZDBF2Q9HCK1 2354 aa10.26□□□□□ -0.77
MSH2-201ENST00000233146 CFIP05156 583 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 Q8N1Y9 231 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 UBTD1Q9HAC8 227 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 TRANK1O15050 2925 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 GOLT1AQ6ZVE7 132 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 THAP8Q8NA92 274 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 NPIPB3Q92617 1050 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 METRNQ9UJH8 293 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 C10orf142B7Z368 130 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 C9JAW5 83 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 YAF2Q8IY57 180 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 FAM57AQ8TBR7 257 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 AAMDCQ9H7C9 122 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 OTORQ9NRC9 128 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 HIGD1AQ9Y241 93 aa10.25□□□□□ -0.77
MSH2-201ENST00000233146 J3KT08 172 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 GRPP07492 148 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 HOXA4Q00056 320 aaPredicted RBP10.24□□□□□ -0.77
MSH2-201ENST00000233146 NDUFA11Q86Y39 141 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 A0A1B0GX51 115 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 NPFFO15130 113 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 IGHV3-13P01766 116 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 MNX1P50219 401 aaPredicted RBP10.24□□□□□ -0.77
MSH2-201ENST00000233146 CFHR1Q03591 330 aa10.24□□□□□ -0.77
MSH2-201ENST00000233146 MRPL23Q16540 153 aaKnown RBP10.24□□□□□ -0.77
MSH2-201ENST00000233146 C17orf82Q86X59 251 aaPredicted RBP10.24□□□□□ -0.77
MSH2-201ENST00000233146 ZNF71Q9NQZ8 489 aaPredicted RBP10.24□□□□□ -0.77
MSH2-201ENST00000233146 ORM2P19652 201 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 PLNP26678 52 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 SSR4P51571 173 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 SDK2Q58EX2 2172 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
MSH2-201ENST00000233146 TRAV8-4A0A0B4J246 113 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 M0R2P5 195 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 TGFAP01135 160 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 LOXL3P58215 753 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 FOXC1Q12948 553 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 TMEM101Q96IK0 257 aa10.23□□□□□ -0.77
MSH2-201ENST00000233146 TNRC18O15417 2968 aaPredicted RBP10.23□□□□□ -0.77
MSH2-201ENST00000233146 SLC25A39Q9BZJ4 359 aaPredicted RBP10.23□□□□□ -0.77
MSH2-201ENST00000233146 MRPL33O75394 65 aaKnown RBP10.22□□□□□ -0.77
MSH2-201ENST00000233146 NDUFA7O95182 113 aa10.22□□□□□ -0.77
MSH2-201ENST00000233146 ZCCHC24Q8N2G6 241 aaKnown RBP10.22□□□□□ -0.77
MSH2-201ENST00000233146 TRAV2A0A0B4J234 112 aa10.22□□□□□ -0.77
MSH2-201ENST00000233146 NDUFA3O95167 84 aa10.22□□□□□ -0.77
MSH2-201ENST00000233146 CCL11P51671 97 aa10.22□□□□□ -0.77
MSH2-201ENST00000233146 ASXL3Q9C0F0 2248 aa10.22□□□□□ -0.77
MSH2-201ENST00000233146 CRIP2P52943 208 aaPredicted RBP10.22□□□□□ -0.77
MSH2-201ENST00000233146 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
MSH2-201ENST00000233146 MRPL36Q9P0J6 103 aaKnown RBP10.22□□□□□ -0.77
MSH2-201ENST00000233146 IGHV3OR15-7A0A075B7D8 119 aa10.21□□□□□ -0.77
MSH2-201ENST00000233146 RPL13AP40429 203 aaKnown RBP10.21□□□□□ -0.77
MSH2-201ENST00000233146 ZNF826PQ6ZT77 177 aa10.21□□□□□ -0.77
MSH2-201ENST00000233146 LINC01600Q96MT4 127 aa10.21□□□□□ -0.77
MSH2-201ENST00000233146 ASCL2Q99929 193 aa10.21□□□□□ -0.77
MSH2-201ENST00000233146 URB1O60287 2271 aaKnown RBP10.21□□□□□ -0.77
MSH2-201ENST00000233146 TMEM75Q8N9X5 138 aa10.21□□□□□ -0.78
MSH2-201ENST00000233146 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.78
MSH2-201ENST00000233146 ONECUT1Q9UBC0 465 aa10.21□□□□□ -0.78
MSH2-201ENST00000233146 OOSP1A8MZH6 123 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 IGHV3-48P01763 117 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 EXOC3-AS1Q8N2X6 119 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 RNF185Q96GF1 192 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 TIMM23O14925 209 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 GAS8-AS1O95177 125 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 HERVK_113P63121 156 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 UTF1Q5T230 341 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 PCNX2A6NKB5 2137 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 INTS1Q8N201 2190 aaKnown RBP10.2□□□□□ -0.78
MSH2-201ENST00000233146 TRBV7-7A0A0K0K1E9 115 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 SAA2P0DJI9 122 aaPredicted RBP10.2□□□□□ -0.78
MSH2-201ENST00000233146 RPS28P62857 69 aaKnown RBP10.2□□□□□ -0.78
MSH2-201ENST00000233146 ERHP84090 104 aaKnown RBP10.2□□□□□ -0.78
MSH2-201ENST00000233146 HES1Q14469 280 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 EDDM3AQ14507 147 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 OR13C6PQ8NH95 151 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
MSH2-201ENST00000233146 NDUFA4L2Q9NRX3 87 aa10.2□□□□□ -0.78
MSH2-201ENST00000233146 PTPRZ1P23471 2315 aaPredicted RBP10.19□□□□□ -0.78
MSH2-201ENST00000233146 SRSF9Q13242 221 aaKnown RBP eCLIP10.19□□□□□ -0.78
MSH2-201ENST00000233146 MYOZ3Q8TDC0 251 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 DMDP11532 3685 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 DOCK7Q96N67 2140 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 IGHV1OR21-1A0A087WYE8 117 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 TNFRSF6BO95407 300 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 PLXDC1Q8IUK5 500 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 C3orf22Q8N5N4 141 aa10.19□□□□□ -0.78
MSH2-201ENST00000233146 INS-IGF2F8WCM5 200 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 TMEM155Q4W5P6 130 aa10.18□□□□□ -0.78
MSH2-201ENST00000233146 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms