RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 NPCDR1Q9BY65 106 aa10.11□□□□□ -0.79
GPN3-201ENST00000228827 CDKN1BP46527 198 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 CLINT1Q14677 625 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 KIR3DS1Q14943 382 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 SLC25A31Q9H0C2 315 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 ZNF586Q9NXT0 402 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 J3KRW8 73 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 SSNA1O43805 119 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 DEFA1P59665 94 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 DEFA3P59666 94 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 OXA1LQ15070 435 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 FCN2Q15485 313 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 GUK1Q16774 197 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 CHAC2Q8WUX2 184 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 MARVELD1Q9BSK0 173 aa10.1□□□□□ -0.79
GPN3-201ENST00000228827 MPDU1O75352 247 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 P0DMU3 169 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 FAM231AP0DMU4 169 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 FAM231CP0DMU5 169 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 DEFB130BP0DP73 79 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 DEFB130AP0DP74 79 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 PYYP10082 97 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 H2BFSP57053 126 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 CYCSP99999 105 aaKnown RBP10.09□□□□□ -0.79
GPN3-201ENST00000228827 TMEM256Q8N2U0 113 aa10.09□□□□□ -0.79
GPN3-201ENST00000228827 TRBV19A0A075B6N1 114 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 LYRM9A8MSI8 78 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 TSPOP30536 169 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 TAS2R60P59551 318 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 TMEM88Q6PEY1 159 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 POM121L12Q8N7R1 296 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 BLNKQ8WV28 456 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 PPP1R1CQ8WVI7 109 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 TIMM9Q9Y5J7 89 aa10.08□□□□□ -0.8
GPN3-201ENST00000228827 PLAC8L1A1L4L8 177 aa10.07□□□□□ -0.8
GPN3-201ENST00000228827 CT45A10P0DMU9 189 aa10.07□□□□□ -0.8
GPN3-201ENST00000228827 GFI1BQ5VTD9 330 aa10.07□□□□□ -0.8
GPN3-201ENST00000228827 WDR61Q9GZS3 305 aaKnown RBP10.07□□□□□ -0.8
GPN3-201ENST00000228827 TMEM14CQ9P0S9 112 aa10.07□□□□□ -0.8
GPN3-201ENST00000228827 H7BYZ3 331 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 M0R3E3 92 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 ZNF253O75346 499 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
GPN3-201ENST00000228827 MIR17HGQ75NE6 70 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 UBE2DNLQ8IWF7 75 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 C16orf74Q96GX8 76 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 FAM210BQ96KR6 192 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 SLC25A2Q9BXI2 301 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 FRAS1Q86XX4 4008 aa10.06□□□□□ -0.8
GPN3-201ENST00000228827 NPIPB6E9PJ23 425 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 M0R2N4 97 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 NDUFB4O95168 129 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 MPC2O95563 127 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 LEPP41159 167 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 ERCC8Q13216 396 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 EXOC3-AS1Q8N2X6 119 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 SMIM3Q9BZL3 60 aa10.05□□□□□ -0.8
GPN3-201ENST00000228827 DNAH6Q9C0G6 4158 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 TRAV12-3A0A0B4J271 114 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 MRPL53Q96EL3 112 aaKnown RBP10.04□□□□□ -0.8
GPN3-201ENST00000228827 ATP5SQ99766 215 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 NOP10Q9NPE3 64 aaKnown RBP10.04□□□□□ -0.8
GPN3-201ENST00000228827 HSPB11Q9Y547 144 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 TIMM8BQ9Y5J9 83 aaPredicted RBP10.04□□□□□ -0.8
GPN3-201ENST00000228827 C17orf112F2Z3M2 114 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 F5H768 121 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 PET100P0DJ07 73 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 RNASE8Q8TDE3 154 aaKnown RBP10.04□□□□□ -0.8
GPN3-201ENST00000228827 TMEM263Q8WUH6 116 aaKnown RBP10.04□□□□□ -0.8
GPN3-201ENST00000228827 FAM167A-AS1Q96KT0 104 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 C20orf144Q9BQM9 153 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 KCNIP2Q9NS61 270 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
GPN3-201ENST00000228827 IGLV2-18A0A075B6J9 118 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 PDE6HQ13956 83 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 ICAM4Q14773 271 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 FAM122CQ6P4D5 195 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 ZNF493Q6ZR52 646 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 CCDC28AQ8IWP9 274 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 ODF3Q96PU9 254 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 FUT9Q9Y231 359 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 PRELID1Q9Y255 219 aa10.03□□□□□ -0.8
GPN3-201ENST00000228827 DNAH2Q9P225 4427 aa10.02□□□□□ -0.8
GPN3-201ENST00000228827 IGKV2-40A0A087WW87 121 aaPredicted RBP10.02□□□□□ -0.81
GPN3-201ENST00000228827 IGKV2D-40P01614 121 aaPredicted RBP10.02□□□□□ -0.81
GPN3-201ENST00000228827 ATP5G1P05496 136 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 OR10J4P0C629 311 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 RPL12P30050 165 aaKnown RBP10.02□□□□□ -0.81
GPN3-201ENST00000228827 ATP5G3P48201 142 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 FFAR4Q5NUL3 377 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 PAXXQ9BUH6 204 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 MRPL32Q9BYC8 188 aaKnown RBP10.02□□□□□ -0.81
GPN3-201ENST00000228827 AGPAT4-IT1Q9H0P7 198 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 ALG5Q9Y673 324 aa10.02□□□□□ -0.81
GPN3-201ENST00000228827 CBY3A6NI87 242 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 OR7C2O60412 319 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 IFNA5P01569 189 aa10.01□□□□□ -0.81
GPN3-201ENST00000228827 NBEAP1P0C6P0 100 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms