RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 PRCDQ00LT1 54 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 ODF3L2Q3SX64 289 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 OR1P1Q8NH06 330 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 PSMG3Q9BT73 122 aaPredicted RBP4.29□□□□□ -1.72
AFP-201ENST00000226359 PBDC1Q9BVG4 233 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 PARD6GQ9BYG4 376 aaPredicted RBP4.29□□□□□ -1.72
AFP-201ENST00000226359 WDR61Q9GZS3 305 aaKnown RBP4.29□□□□□ -1.72
AFP-201ENST00000226359 TMEM14BQ9NUH8 114 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 TRAV25A0A0B4J276 109 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 A0A1B0GV50 99 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 SMCO3A2RU48 225 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 A8MWP6 167 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 C17orf112F2Z3M2 114 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 GNG7O60262 68 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 FGF7P21781 194 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 SERF2P84101 59 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 TMEM41BQ5BJD5 291 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 SUMO4Q6EEV6 95 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 C19orf35Q6ZS72 473 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 OR10W1Q8NGF6 305 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 ZNF502Q8TBZ5 544 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 C20orf24Q9BUV8 137 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 VCX2Q9H322 139 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 TIMM9Q9Y5J7 89 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 S4R3C0 116 aa4.29□□□□□ -1.72
AFP-201ENST00000226359 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
AFP-201ENST00000226359 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 C15orf62A8K5M9 175 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 E7EUB6 86 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 K7EQM0 130 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 NDUFA4O00483 81 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 MBP02144 154 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 SFTA3P0C7M3 94 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 NPY1RP25929 384 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 FHITP49789 147 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 HERV-K104P63124 156 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 GUK1Q16774 197 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 KLK9Q2XQG4 91 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 ZNF114Q8NC26 417 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 TMEM190Q8WZ59 177 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 MRPL53Q96EL3 112 aaKnown RBP4.28□□□□□ -1.72
AFP-201ENST00000226359 RCHY1Q96PM5 261 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 RSG1Q9BU20 258 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 GGACTQ9BVM4 153 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 EIF5A2Q9GZV4 153 aaKnown RBP4.28□□□□□ -1.72
AFP-201ENST00000226359 RPS10P5Q9NQ39 176 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 DAZ1Q9NQZ3 744 aaKnown RBP4.28□□□□□ -1.72
AFP-201ENST00000226359 MRPL27Q9P0M9 148 aaKnown RBP4.28□□□□□ -1.72
AFP-201ENST00000226359 KLK9Q9UKQ9 250 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 RFNGQ9Y644 331 aa4.28□□□□□ -1.72
AFP-201ENST00000226359 IGHV3-21A0A0B4J1V1 117 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 A0A1B0GW64 132 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 OR4C46A6NHA9 309 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 PMS2P5A8MQ11 134 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 YIF1AO95070 293 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 CD5P06127 495 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 ATP5IP56385 69 aaPredicted RBP4.27□□□□□ -1.73
AFP-201ENST00000226359 WT1-ASQ06250 92 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 DEFB114Q30KQ6 69 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 FFAR4Q5NUL3 377 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 LYPD6BQ8NI32 183 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 ALKBH7Q9BT30 221 aaPredicted RBP4.27□□□□□ -1.73
AFP-201ENST00000226359 A0A1B0GV90 55 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 MPDU1O75352 247 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 MT-CO2P00403 227 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 IFNA1P01562 189 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 RD3LP0DJH9 198 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 RAB5AP20339 215 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 CBLN1P23435 193 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 OPRK1P41145 380 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 CMC4P56277 68 aaPredicted RBP4.27□□□□□ -1.73
AFP-201ENST00000226359 TAS2R60P59551 318 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 PAFAH1B2P68402 229 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 RAB31Q13636 194 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 ACOT6Q3I5F7 207 aaPredicted RBP4.27□□□□□ -1.73
AFP-201ENST00000226359 ACTR3CQ9C0K3 210 aaPredicted RBP4.27□□□□□ -1.73
AFP-201ENST00000226359 NPVFQ9HCQ7 196 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 KCNIP2Q9NS61 270 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 SLC39A9Q9NUM3 307 aa4.27□□□□□ -1.73
AFP-201ENST00000226359 IGHV3-35A0A0C4DH35 117 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 TMEM213A2RRL7 107 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 RBFOX3A6NFN3 312 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 OR11H12B2RN74 326 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 INS-IGF2F8WCM5 200 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 C3orf84H3BNL1 204 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 S100A2P29034 98 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 FCGR2BP31994 310 aaPredicted RBP4.26□□□□□ -1.73
AFP-201ENST00000226359 AKR1C3P42330 323 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 LCN15Q6UWW0 184 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 OR10G4Q8NGN3 311 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 OR10G9Q8NGN4 311 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 OR10G7Q8NGN6 311 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 CACNG8Q8WXS5 425 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 NPCDR1Q9BY65 106 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 SMDT1Q9H4I9 107 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 VSIRQ9H7M9 311 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 RPRMQ9NS64 109 aa4.26□□□□□ -1.73
AFP-201ENST00000226359 TNCP24821 2201 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms