RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 C10orf105Q8TEF2 133 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 NCOR1P1Q9H4R4 102 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 SIGLEC9Q9Y336 463 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 ARHGAP21Q5T5U3 1957 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 CHD3Q12873 2000 aaKnown RBP7.59□□□□□ -1.19
CCDC113-201ENST00000219299 DYSFO75923 2080 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 CACNG7P62955 275 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 LINC01559Q495D7 138 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 BBC3Q96PG8 261 aaPredicted RBP7.59□□□□□ -1.19
CCDC113-201ENST00000219299 EPDR1Q9UM22 224 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 IGHV3-66A0A0C4DH42 116 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 NDUFA3O95167 84 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 PPBPP02775 128 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 C3orf79P0CE67 100 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 TMEM249Q2WGJ8 235 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 LY96Q9Y6Y9 160 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 CMC4P56277 68 aaPredicted RBP7.59□□□□□ -1.19
CCDC113-201ENST00000219299 DIAPH2-AS1Q14236 149 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 ZFAND6Q6FIF0 208 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 RNF5Q99942 180 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 NXT2Q9NPJ8 142 aaKnown RBP7.59□□□□□ -1.19
CCDC113-201ENST00000219299 ARHGAP32A7KAX9 2087 aa7.59□□□□□ -1.19
CCDC113-201ENST00000219299 TRAV41A0A0B4J266 112 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 MST1LQ2TV78 715 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 LYPD6Q86Y78 171 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 MRAP2Q96G30 205 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 MRPL27Q9P0M9 148 aaKnown RBP7.58□□□□□ -1.2
CCDC113-201ENST00000219299 SMPXQ9UHP9 88 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 COX11Q9Y6N1 276 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 CD5LO43866 347 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 TMEM167AQ8TBQ9 72 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 IFI27L1Q96BM0 104 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 ITGB1BP1O14713 200 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 GAGE2BQ13066 116 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 GAGE2EQ4V326 116 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 MPV17L2Q567V2 206 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 NMSQ5H8A3 153 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 PVRIGQ6DKI7 326 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 Q6ZRM9 215 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 GAGE2DQ9UEU5 116 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 A0A0G2JRQ6 117 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 ZNF56Q15929 161 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 FAM159AQ6UWV7 190 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 OR5AN1Q8NGI8 311 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 SNHG12Q9BXW3 62 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 GAGE12BA1L429 117 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 IGKCP01834 107 aa7.58□□□□□ -1.2
CCDC113-201ENST00000219299 TRAV8-4A0A0B4J246 113 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 PSG1P11464 419 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 ASIPP42127 132 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 RPP25LQ8N5L8 163 aaKnown RBP7.57□□□□□ -1.2
CCDC113-201ENST00000219299 IGFBPL1Q8WX77 278 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 H7C1H1 209 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 PAX1P15863 534 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 C10orf91Q5T1B1 145 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 C8orf46Q8TAG6 207 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 POLR3KQ9Y2Y1 108 aaPredicted RBP7.57□□□□□ -1.2
CCDC113-201ENST00000219299 CNTFRP26992 372 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 GNG5P63218 68 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 GAGE1Q13065 139 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 C15orf32Q32M92 178 aa7.57□□□□□ -1.2
CCDC113-201ENST00000219299 DSPP15924 2871 aaKnown RBP7.56□□□□□ -1.2
CCDC113-201ENST00000219299 PSMB11A5LHX3 300 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 CD69Q07108 199 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 TMEM95Q3KNT9 176 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 FAM90A2PQ658T7 463 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 IGHV3OR16-12A0A075B7B8 117 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 PAX2Q02962 417 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 FAM74A4Q5TZK3 123 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 SLC50A1Q9BRV3 221 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 SRSF1Q07955 248 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC113-201ENST00000219299 GTSF1LQ9H1H1 148 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 MUC21A0A0G2JKD1 596 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 MUC21A0A140T8X8 626 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 TCRBV4S1A1TA0A5B7 111 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 M0R381 172 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 RNASE1P07998 156 aaKnown RBP7.56□□□□□ -1.2
CCDC113-201ENST00000219299 OCIAD2Q56VL3 154 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 MUC21Q5SSG8 566 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 FAM71F2Q6NXP2 309 aa7.56□□□□□ -1.2
CCDC113-201ENST00000219299 J3QLI3 93 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 BCL6BQ8N143 479 aaPredicted RBP7.55□□□□□ -1.2
CCDC113-201ENST00000219299 PLXNB1O43157 2135 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 FABP5P3A8MUU1 101 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 C9JQL5 133 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 ANAPC10Q9UM13 185 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 H3BRM9 83 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 DUSP14O95147 198 aaKnown RBP7.55□□□□□ -1.2
CCDC113-201ENST00000219299 SUMO2P61956 95 aaKnown RBP7.55□□□□□ -1.2
CCDC113-201ENST00000219299 LCN12Q6JVE5 192 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 TMEM14EPQ6UXP3 125 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 LINC00311Q8N616 119 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 ZFP36P26651 326 aaKnown RBP7.55□□□□□ -1.2
CCDC113-201ENST00000219299 Q0VG73 95 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 NSUN5P1Q3KNT7 163 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 ASCL2Q99929 193 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 CST9LQ9H4G1 147 aa7.55□□□□□ -1.2
CCDC113-201ENST00000219299 A0A087X0K7 114 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms