RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
NDFIP2-201ENST00000218652 EDA2RQ9HAV5 297 aa12.12□□□□□ -0.47
NDFIP2-201ENST00000218652 PCNTO95613 3336 aa12.12□□□□□ -0.47
NDFIP2-201ENST00000218652 GBF1Q92538 1859 aa12.12□□□□□ -0.47
NDFIP2-201ENST00000218652 Q6ZS49 121 aa12.12□□□□□ -0.47
NDFIP2-201ENST00000218652 DTX2Q86UW9 622 aa12.12□□□□□ -0.47
NDFIP2-201ENST00000218652 FAM231BA6NCW3 169 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 COL8A2P25067 703 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 Q0VG73 95 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 C20orf144Q9BQM9 153 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 MYMXA0A1B0GTQ4 84 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 DEFB130BP0DP73 79 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 DEFB130AP0DP74 79 aa12.11□□□□□ -0.47
NDFIP2-201ENST00000218652 FHL1Q13642 323 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 NYNRINQ9P2P1 1898 aaKnown RBP12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 TRBV7-1A0A0A6YYK4 115 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 B3GALT5-AS1P59052 145 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 LTBP4Q8N2S1 1624 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 ANK1P16157 1881 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 PLXNB1O43157 2135 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 SHANK2-AS3Q9BTD1 123 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 A0A0G2JNJ9 132 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 DKK1O94907 266 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 GAGE2AQ6NT46 116 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 Q9UFV3 132 aa12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 TNS1Q9HBL0 1735 aaKnown RBP12.1□□□□□ -0.47
NDFIP2-201ENST00000218652 B4DSR2 109 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 SYNJ2BPP57105 145 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 ASCL4Q6XD76 172 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 C2orf66Q6UXQ4 117 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 IGLC2P0DOY2 106 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 SAA4P35542 130 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 PAX9P55771 341 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 DEFB131AP59861 70 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 MDS2Q8NDY4 140 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 BPESC1Q9GZL8 116 aa12.09□□□□□ -0.47
NDFIP2-201ENST00000218652 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
NDFIP2-201ENST00000218652 MAJINQ3KP22 176 aa12.08□□□□□ -0.48
NDFIP2-201ENST00000218652 PTPRDP23468 1912 aa12.08□□□□□ -0.48
NDFIP2-201ENST00000218652 LEPROTO15243 131 aa12.08□□□□□ -0.48
NDFIP2-201ENST00000218652 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 RGPD3A6NKT7 1758 aaPredicted RBP12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 SLC25A16P16260 332 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 PRSS57Q6UWY2 283 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 HIVEP3Q5T1R4 2406 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 KLHL30-AS1Q8NEE0 82 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 TMEM190Q8WZ59 177 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 C1orf147Q96MC9 270 aaPredicted RBP12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 DAZ1Q9NQZ3 744 aaKnown RBP12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 TP53TG1Q9Y2A0 90 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 A0A0G2JMZ2 1700 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 LRRC37A2A6NM11 1700 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 LRRC37AA6NMS7 1700 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 NPSP0C0P6 89 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 SLAQ13239 276 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 PDE6HQ13956 83 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 FAM104BQ5XKR9 115 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 HAPLN4Q86UW8 402 aa12.07□□□□□ -0.48
NDFIP2-201ENST00000218652 MBD3L4A6NDZ8 208 aaPredicted RBP12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 MBD3L3A6NE82 208 aaPredicted RBP12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 MBD3L5A6NJ08 208 aaPredicted RBP12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 MBD3L2Q8NHZ7 208 aaPredicted RBP12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 USMG5Q96IX5 58 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 IGLL1P15814 213 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 MSRB2Q9Y3D2 182 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 FNDC10F2Z333 226 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 ZNF114Q8NC26 417 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 M0R1W7 72 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 WISP1O95388 367 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 Q6ZWC4 215 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 XCL2Q9UBD3 114 aa12.06□□□□□ -0.48
NDFIP2-201ENST00000218652 NDUFB8O95169 186 aa12.05□□□□□ -0.48
NDFIP2-201ENST00000218652 SPINK13Q1W4C9 94 aa12.05□□□□□ -0.48
NDFIP2-201ENST00000218652 MORN5Q5VZ52 161 aa12.05□□□□□ -0.48
NDFIP2-201ENST00000218652 ZNF726P1Q15940 193 aa12.05□□□□□ -0.48
NDFIP2-201ENST00000218652 PATJQ8NI35 1801 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 HIVEP2P31629 2446 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 VWC2LB2RUY7 222 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 G3V318 75 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 ASPHD1Q5U4P2 390 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 IGHV3-16A0A0C4DH30 117 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 PFN2P35080 140 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 FOXL2NBQ6ZUU3 175 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 C8orf49Q96NF6 230 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 GFRA4Q9GZZ7 299 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 TMEM14BQ9NUH8 114 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 RSPO3Q9BXY4 272 aaPredicted RBP12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 IL17RELQ6ZVW7 336 aa12.04□□□□□ -0.48
NDFIP2-201ENST00000218652 E7EQL1 145 aa12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 MRPL52Q86TS9 123 aaKnown RBP12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 KLF12Q9Y4X4 402 aa12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 VWC2Q2TAL6 325 aa12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 Q6ZS92 163 aa12.03□□□□□ -0.48
NDFIP2-201ENST00000218652 ATP6V0E1O15342 81 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms