RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 SS18Q15532 418 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 DOCK8Q8NF50 2099 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 ATP6V0E1O15342 81 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 RIPPLY3P57055 190 aa10.93□□□□□ -0.66
SF3A1-201ENST00000215793 PFN1P07737 140 aaKnown RBP10.92□□□□□ -0.66
SF3A1-201ENST00000215793 IGFL3Q6UXB1 125 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 DNAJC30Q96LL9 226 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 C1orf147Q96MC9 270 aaPredicted RBP10.92□□□□□ -0.66
SF3A1-201ENST00000215793 XIRP1Q702N8 1843 aaKnown RBP10.92□□□□□ -0.66
SF3A1-201ENST00000215793 CD5LO43866 347 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 ESDP10768 282 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 KIR3DS1Q14943 382 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 MST1LQ2TV78 715 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 ZNF833PQ6ZTB9 187 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 NEGR1Q7Z3B1 354 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 DEFB104AQ8WTQ1 72 aa10.92□□□□□ -0.66
SF3A1-201ENST00000215793 IL17RELQ6ZVW7 336 aa10.91□□□□□ -0.66
SF3A1-201ENST00000215793 LINC00311Q8N616 119 aa10.91□□□□□ -0.66
SF3A1-201ENST00000215793 CHAC1Q9BUX1 264 aa10.91□□□□□ -0.66
SF3A1-201ENST00000215793 TRBV19A0A075B6N1 114 aa10.91□□□□□ -0.66
SF3A1-201ENST00000215793 PRSS46E5RG02 174 aa10.91□□□□□ -0.66
SF3A1-201ENST00000215793 SPXQ9BT56 116 aa10.91□□□□□ -0.66
SF3A1-201ENST00000215793 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.91□□□□□ -0.66
SF3A1-201ENST00000215793 IGHV1-69DA0A0B4J2H0 117 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 IGHV1-69P01742 117 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 FAM104BQ5XKR9 115 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 ZNF664Q8N3J9 261 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 UBE2V1Q13404 147 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 Q6ZR03 302 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 F8WEM9 126 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 DEFB130BP0DP73 79 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 DEFB130AP0DP74 79 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 CEACAM8P31997 349 aaPredicted RBP10.9□□□□□ -0.66
SF3A1-201ENST00000215793 CFHR2P36980 270 aa10.9□□□□□ -0.66
SF3A1-201ENST00000215793 C18orf32Q8TCD1 76 aa10.9□□□□□ -0.67
SF3A1-201ENST00000215793 ZNRD1Q9P1U0 126 aa10.9□□□□□ -0.67
SF3A1-201ENST00000215793 PAX9P55771 341 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 DEFB121Q5J5C9 76 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 MED13LQ71F56 2210 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 SHANK1Q9Y566 2161 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 LOXP28300 417 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-201ENST00000215793 SSBP2P81877 361 aaPredicted RBP10.89□□□□□ -0.67
SF3A1-201ENST00000215793 C2orf66Q6UXQ4 117 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 FAM231DQ6ZW35 169 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 TRPM7Q96QT4 1865 aa10.89□□□□□ -0.67
SF3A1-201ENST00000215793 C9JQL5 133 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 PSCAO43653 123 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 HIST1H4AP62805 103 aaKnown RBP10.88□□□□□ -0.67
SF3A1-201ENST00000215793 TMEM141Q96I45 108 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 DKK1O94907 266 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 OCIAD2Q56VL3 154 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 PROK2Q9HC23 129 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 LTBP1Q14766 1721 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 TMEM213A2RRL7 107 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 C20orf144Q9BQM9 153 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 IGHV2-70DA0A0C4DH43 119 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 C17orf58Q2M2W7 97 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 TEX36Q5VZQ5 186 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 RUSC1-AS1Q66K80 236 aa10.88□□□□□ -0.67
SF3A1-201ENST00000215793 Q8N8P6 123 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 TP53TG1Q9Y2A0 90 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 INS-IGF2F8WCM5 200 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 TMEM14CQ9P0S9 112 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 KLF12Q9Y4X4 402 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 TRAV8-3A0A0A6YYJ7 113 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 NDUFA4O00483 81 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 LINC01619G3V211 115 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 CDK2AP2O75956 126 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 STPG4Q8N801 248 aa10.87□□□□□ -0.67
SF3A1-201ENST00000215793 SP5Q6BEB4 398 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-201ENST00000215793 MCRIP2Q9BUT9 160 aaKnown RBP10.86□□□□□ -0.67
SF3A1-201ENST00000215793 IGLV1-44P01699 117 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 SPINK13Q1W4C9 94 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 PRR25Q96S07 402 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 TCF20Q9UGU0 1960 aaKnown RBP10.86□□□□□ -0.67
SF3A1-201ENST00000215793 IGLV3-9A0A075B6K5 115 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 A8MWP6 167 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 G3V318 75 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 IGKV1-39P01597 117 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 IGKV1D-39P04432 117 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 PRR30Q53SZ7 412 aaPredicted RBP10.86□□□□□ -0.67
SF3A1-201ENST00000215793 ANK1P16157 1881 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 WDR86Q86TI4 376 aa10.86□□□□□ -0.67
SF3A1-201ENST00000215793 IGHV1OR15-1A0A075B7D0 117 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 VWC2LB2RUY7 222 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 GAGE12BA1L429 117 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 I3L3M4 83 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 PMVKQ15126 192 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 C3orf56Q8N813 242 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 LY6G6EA0A0G2JKS1 128 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 WT1-ASQ06250 92 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 ARTNQ5T4W7 220 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 U3KQA8 63 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 TRBV25-1A0A075B6N4 114 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 KNCNA6PVL3 124 aa10.85□□□□□ -0.67
SF3A1-201ENST00000215793 CYYR1Q96J86 154 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 227.4 ms