RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ERCC8Q13216 396 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 C22orf34Q6ZV56 151 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 LINC00479Q96M42 142 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 TSSC4Q9Y5U2 329 aaPredicted RBP9.07□□□□□ -0.96
PKP2-201ENST00000070846 F5H768 121 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 PRR31Q5SQ13 230 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 FOXC2Q99958 501 aa9.07□□□□□ -0.96
PKP2-201ENST00000070846 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.06□□□□□ -0.96
PKP2-201ENST00000070846 NDUFA4O00483 81 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 C21orf62-AS1Q17RA5 79 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 FAM19A2Q8N3H0 131 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 CHD3Q12873 2000 aaKnown RBP9.06□□□□□ -0.96
PKP2-201ENST00000070846 RNF151Q2KHN1 245 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 HIST1H4GQ99525 98 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 LOC107984156A0A0G2JMH3 177 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 CFHR3Q02985 330 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 TCF23Q7RTU1 214 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 ARL17AQ8IVW1 177 aa9.06□□□□□ -0.96
PKP2-201ENST00000070846 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
PKP2-201ENST00000070846 HOXD3P31249 432 aaPredicted RBP9.05□□□□□ -0.96
PKP2-201ENST00000070846 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
PKP2-201ENST00000070846 Q8NFD4 153 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 F8P00451 2351 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 MAST4O15021 2626 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 PSCAO43653 123 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 COX6CP09669 75 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 CACNG7P62955 275 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 LYPD1Q8N2G4 141 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 A0A087X0M5 115 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 A0A1B0GX30 115 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
PKP2-201ENST00000070846 SRSF3P84103 164 aaKnown RBP9.05□□□□□ -0.96
PKP2-201ENST00000070846 CYSLTR1Q9Y271 337 aa9.05□□□□□ -0.96
PKP2-201ENST00000070846 H3BRM9 83 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 NCR2O95944 276 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 DAD1P61803 113 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 ALKBH7Q9BT30 221 aaPredicted RBP9.04□□□□□ -0.96
PKP2-201ENST00000070846 CYTL1Q9NRR1 136 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 PPBPP02775 128 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 ARHGAP32A7KAX9 2087 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 A0A087WWL8 130 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 TMEM238LA0A1B0GVL6 79 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 A6NDN8 102 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 A6NJY4 79 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 ADARB2-AS1A8MUL3 147 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 LYZL1Q6UWQ5 148 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 C1QL4Q86Z23 238 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 FNDC10F2Z333 226 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 PDE6HQ13956 83 aa9.04□□□□□ -0.96
PKP2-201ENST00000070846 TRAV12-2A0A075B6T6 113 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 ARMS2P0C7Q2 107 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 HINT1P49773 126 aaPredicted RBP9.03□□□□□ -0.96
PKP2-201ENST00000070846 SH2D1AO60880 128 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 CD28P10747 220 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 RPL24P83731 157 aaKnown RBP9.03□□□□□ -0.96
PKP2-201ENST00000070846 BCL6BQ8N143 479 aaPredicted RBP9.03□□□□□ -0.96
PKP2-201ENST00000070846 A0A0U1RRA0 63 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 IGLC1P0CG04 106 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 HOXA5P20719 270 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 KLK9Q9UKQ9 250 aa9.03□□□□□ -0.96
PKP2-201ENST00000070846 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
PKP2-201ENST00000070846 PHLDA1Q8WV24 401 aaPredicted RBP9.02□□□□□ -0.96
PKP2-201ENST00000070846 C1orf159Q96HA4 380 aa9.02□□□□□ -0.96
PKP2-201ENST00000070846 PMCHL2Q9BQD1 86 aa9.02□□□□□ -0.96
PKP2-201ENST00000070846 IGHV7-81A0A0B4J1V7 117 aa9.02□□□□□ -0.97
PKP2-201ENST00000070846 PLXNB3Q9ULL4 1909 aa9.02□□□□□ -0.97
PKP2-201ENST00000070846 APOC4P55056 127 aa9.02□□□□□ -0.97
PKP2-201ENST00000070846 C1orf194Q5T5A4 169 aa9.02□□□□□ -0.97
PKP2-201ENST00000070846 VPS25Q9BRG1 176 aa9.02□□□□□ -0.97
PKP2-201ENST00000070846 ZMAT4Q9H898 229 aa9.02□□□□□ -0.97
PKP2-201ENST00000070846 ATRQ13535 2644 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 TRAV1-1A0A0B4J248 108 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 GAGE12BA1L429 117 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 WIPF3A6NGB9 483 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 GAGE7O76087 117 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 GAGE12FP0CL80 117 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 GAGE12GP0CL81 117 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 GAGE12IP0CL82 117 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 SLC25A34Q6PIV7 304 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 NXT2Q9NPJ8 142 aaKnown RBP9.01□□□□□ -0.97
PKP2-201ENST00000070846 COL4A4P53420 1690 aaPredicted RBP9.01□□□□□ -0.97
PKP2-201ENST00000070846 SLURP1P55000 103 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 SRSF1Q07955 248 aaKnown RBP eCLIP9.01□□□□□ -0.97
PKP2-201ENST00000070846 POU2AF1Q16633 256 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 SPATA45Q537H7 98 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 ATRAIDQ6UW56 229 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 A0A0C4DFX4 3053 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 IGLC7A0M8Q6 106 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 A8MXK9 166 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 NDUFA3O95167 84 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 LMO4P61968 165 aa9.01□□□□□ -0.97
PKP2-201ENST00000070846 FNDC4Q9H6D8 234 aaPredicted RBP9.01□□□□□ -0.97
PKP2-201ENST00000070846 IGHV3-16A0A0C4DH30 117 aa9□□□□□ -0.97
PKP2-201ENST00000070846 IGHV7-4-1A0A0J9YVY3 117 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms