RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PIFOQ8TCI5 191 aa6.4□□□□□ -1.38
VAMP3-201ENST00000054666 TPPP3Q9BW30 176 aa6.4□□□□□ -1.38
VAMP3-201ENST00000054666 NRN1Q9NPD7 142 aa6.4□□□□□ -1.38
VAMP3-201ENST00000054666 SMAD5-AS1Q9Y6J3 95 aa6.4□□□□□ -1.38
VAMP3-201ENST00000054666 TMEM189A5PLL7 270 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 H3BUA1 57 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 SH2D1AO60880 128 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 IGF1P05019 195 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 BMI1P35226 326 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 C19orf54Q5BKX5 351 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 Q71RC1 249 aaPredicted RBP6.4□□□□□ -1.39
VAMP3-201ENST00000054666 LINC00527Q9UJ94 153 aa6.4□□□□□ -1.39
VAMP3-201ENST00000054666 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.39□□□□□ -1.39
VAMP3-201ENST00000054666 IGHV3-66A0A0C4DH42 116 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 A6NDX4 124 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 PRB1P04280 392 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 ARL3P36405 182 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 RPS20P60866 119 aaKnown RBP6.39□□□□□ -1.39
VAMP3-201ENST00000054666 LCN12Q6JVE5 192 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 REC114Q7Z4M0 266 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 PRR25Q96S07 402 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 VAMP8Q9BV40 100 aa6.39□□□□□ -1.39
VAMP3-201ENST00000054666 LOC102724200A0A096LPH7 203 aaPredicted RBP6.38□□□□□ -1.39
VAMP3-201ENST00000054666 KIR2DL5BA0A0G2JN68 375 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 KIR2DL5BA0A0G2JPC4 375 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 CLPSL1A2RUU4 121 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 M0R2Z0 102 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 IGHG2P01859 326 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 ARMS2P0C7Q2 107 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 PAX1P15863 534 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 CD33P20138 364 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 HLA-DMBP28068 263 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 TEX43Q6ZNM6 134 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 COX8CQ7Z4L0 72 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 KIR2DL5AQ8N109 375 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 Q8TAT8 98 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 USMG5Q96IX5 58 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 CSMD1Q96PZ7 3565 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 RBAKDNA6NC62 111 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF207O43670 478 aaKnown RBP6.38□□□□□ -1.39
VAMP3-201ENST00000054666 APOHP02749 345 aaPredicted RBP6.38□□□□□ -1.39
VAMP3-201ENST00000054666 CRIP1P50238 77 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 IGFL4Q6B9Z1 124 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 FAM19A2Q8N3H0 131 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 LINC01356Q8N9X3 169 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 NRGNQ92686 78 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 MRPL53Q96EL3 112 aaKnown RBP6.38□□□□□ -1.39
VAMP3-201ENST00000054666 C14orf144Q96I85 54 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 NDUFAF3Q9BU61 184 aa6.38□□□□□ -1.39
VAMP3-201ENST00000054666 TMSB15BA0A087X1C1 80 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 BRI3O95415 125 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 PF4V1P10720 104 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
VAMP3-201ENST00000054666 VGLL1Q99990 258 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 CLEC5AQ9NY25 188 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 IGHV3-49A0A0A0MS15 119 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 NDUFA4O00483 81 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 RAB4AP20338 218 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 PRR31Q5SQ13 230 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 C8orf86Q6ZUL3 223 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 NIT1Q86X76 327 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 RNF182Q8N6D2 247 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 GATD1Q8NB37 220 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 COL12A1Q99715 3063 aa6.37□□□□□ -1.39
VAMP3-201ENST00000054666 A0A0G2JLM5 398 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 A1L4Q6 167 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 J3QLI3 93 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 IGHG4P01861 327 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 PPIFP30405 207 aaKnown RBP6.36□□□□□ -1.39
VAMP3-201ENST00000054666 TMEM78Q5T7P6 136 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 DMRTA1Q5VZB9 504 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 CYB5R2Q6BCY4 276 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 C9orf139Q6ZV77 190 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 FER1L6-AS1Q8NA97 138 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 C16orf92Q96LL3 132 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 PAM16Q9Y3D7 125 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 SVEP1Q4LDE5 3571 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.36□□□□□ -1.392e-8■■■□□ 17.7
VAMP3-201ENST00000054666 SPG11Q96JI7 2443 aa6.36□□□□□ -1.39
VAMP3-201ENST00000054666 FAM181BA6NEQ2 426 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 FABP5P3A8MUU1 101 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 C3orf79P0CE67 100 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 SRSF2Q01130 221 aaKnown RBP6.35□□□□□ -1.39
VAMP3-201ENST00000054666 LYZL1Q6UWQ5 148 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 ZNF843Q8N446 348 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 RNF114Q9Y508 228 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 U3KQE9 123 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 IGSF10Q6WRI0 2623 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 IGHV3-11P01762 117 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 ORM1P02763 201 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
VAMP3-201ENST00000054666 ERCC8Q13216 396 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 GLMPQ8WWB7 406 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 BBC3Q96PG8 261 aaPredicted RBP6.35□□□□□ -1.39
VAMP3-201ENST00000054666 C20orf144Q9BQM9 153 aa6.35□□□□□ -1.39
VAMP3-201ENST00000054666 PRAC2D3DTV9 90 aa6.34□□□□□ -1.39
VAMP3-201ENST00000054666 M0QZ24 198 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms