RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 NPIPB6E9PJ23 425 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 L7N2F9 121 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 NUDT3O95989 172 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 HTN1P15515 57 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 RPL29P47914 159 aaKnown RBP11.06□□□□□ -0.64
ERCC1-201ENST00000013807 VAMP2P63027 116 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 ZNF846Q147U1 533 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 C6orf223Q8N319 242 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 OR1L4Q8NGR5 311 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 ZNF431Q8TF32 576 aaPredicted RBP11.06□□□□□ -0.64
ERCC1-201ENST00000013807 PFDN5Q99471 154 aa11.06□□□□□ -0.64
ERCC1-201ENST00000013807 CCSO14618 274 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 CT45A10P0DMU9 189 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 TNP2Q05952 138 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 DAZ2Q13117 558 aaKnown RBP11.05□□□□□ -0.64
ERCC1-201ENST00000013807 MIC13Q5XKP0 118 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 ZNF575Q86XF7 245 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 MRPL53Q96EL3 112 aaKnown RBP11.05□□□□□ -0.64
ERCC1-201ENST00000013807 C2orf50Q96LR7 162 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 LYRM2Q9NU23 88 aaPredicted RBP11.05□□□□□ -0.64
ERCC1-201ENST00000013807 UQCC1Q9NVA1 299 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 RYR1P21817 5038 aa11.05□□□□□ -0.64
ERCC1-201ENST00000013807 CST7O76096 145 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 SNRPCP09234 159 aaKnown RBP11.04□□□□□ -0.64
ERCC1-201ENST00000013807 S100A11P31949 105 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 SULT1A1P50225 295 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 CCDC28AQ8IWP9 274 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 RXFP4Q8TDU9 374 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 C18orf15Q96N68 181 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 PYGO2Q9BRQ0 406 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 PARD6GQ9BYG4 376 aaPredicted RBP11.04□□□□□ -0.64
ERCC1-201ENST00000013807 ZNF586Q9NXT0 402 aa11.04□□□□□ -0.64
ERCC1-201ENST00000013807 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 FAM24AA6NFZ4 105 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 PRB4P10163 310 aaPredicted RBP11.03□□□□□ -0.64
ERCC1-201ENST00000013807 M6PRP20645 277 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 LEPP41159 167 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 CAV2P51636 162 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 PDE6HQ13956 83 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 SSX7Q7RTT5 188 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 C12orf45Q8N5I9 185 aaPredicted RBP11.03□□□□□ -0.64
ERCC1-201ENST00000013807 FAM19A4Q96LR4 140 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 LINC00467Q9BRT7 94 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 UPK3BQ9BT76 320 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 SLC39A9Q9NUM3 307 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 NDUFA13Q9P0J0 144 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 TMEM14CQ9P0S9 112 aa11.03□□□□□ -0.64
ERCC1-201ENST00000013807 LSM5Q9Y4Y9 91 aaKnown RBP11.03□□□□□ -0.64
ERCC1-201ENST00000013807 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 C5orf51A6NDU8 294 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 H3BTX0 84 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
ERCC1-201ENST00000013807 PVALBP20472 110 aaPredicted RBP11.02□□□□□ -0.65
ERCC1-201ENST00000013807 HOXA5P20719 270 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 BCAP31P51572 246 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 ATP6V1FQ16864 119 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 TMEM252Q8N6L7 170 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 GNPNAT1Q96EK6 184 aaPredicted RBP11.02□□□□□ -0.65
ERCC1-201ENST00000013807 SEC22CQ9BRL7 303 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 Q9H8V8 135 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 NUDT15Q9NV35 164 aa11.02□□□□□ -0.65
ERCC1-201ENST00000013807 TRAV6A0A075B6T7 132 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 TRAV26-1A0A087WT03 109 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 A0A1W2PPQ1 181 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 KLLNB2CW77 178 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 MPDU1O75352 247 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 NDUFB4O95168 129 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 RLN2P04090 185 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 SLC25A5P05141 298 aaKnown RBP11.01□□□□□ -0.65
ERCC1-201ENST00000013807 HBG1P69891 147 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 HBG2P69892 147 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 CLINT1Q14677 625 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 LINC00299Q6ZSB3 139 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 LINC00477Q96M19 166 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 CCDC32Q9BV29 185 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 PRELID1Q9Y255 219 aa11.01□□□□□ -0.65
ERCC1-201ENST00000013807 TRAV12-3A0A0B4J271 114 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 IGSF23A1L1A6 192 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 FAM25EA8MYX2 175 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 SNURFLB1AK76 121 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
ERCC1-201ENST00000013807 NMBP08949 121 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 HIST1H1EP10412 219 aaKnown RBP11□□□□□ -0.65
ERCC1-201ENST00000013807 OR5I1Q13606 314 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 C11orf72Q8NBR9 251 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 Q9H3A6 140 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 HSPG2P98160 4391 aa11□□□□□ -0.65
ERCC1-201ENST00000013807 GAGE12BA1L429 117 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 GAGE7O76087 117 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 H2AFB2P0C5Z0 115 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 GAGE12FP0CL80 117 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 GAGE12GP0CL81 117 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 GAGE12IP0CL82 117 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 CRISP2P16562 243 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 RAB32Q13637 225 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 ESRGQ1W209 222 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 STX12Q86Y82 276 aa10.99□□□□□ -0.65
ERCC1-201ENST00000013807 ZNF680Q8NEM1 530 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms