RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 H2afb1Q9CQ70 111 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Lsm7Q9CQQ8 103 aaKnown RBP8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Nhp2Q9CRB2 153 aaKnown RBP8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Clec1bQ9JL99 229 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Tpsg1Q9QUL7 311 aa8.22□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Igkv10-94A0A075B5L1 115 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Ighv5-16A0A0B4J1P4 117 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 OdamA1E960 273 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr194L7N1Y8 306 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Il13P20109 131 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Mcpt8P43430 247 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Hsd17b8P50171 259 aaKnown RBP8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Mrps6P58064 125 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 MybphlQ5FW53 355 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr1419Q7TQS2 343 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Dcaf12Q8BGZ3 453 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Adipor2Q8BQS5 386 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 BB014433Q8C5R5 389 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Kremen2Q8K1S7 461 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Vmn1r191Q8K4D0 298 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr1202Q8VF98 309 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr1370Q8VFG4 316 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr344Q8VFP9 309 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Rbms1Q91W59 403 aaKnown RBP8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cela1Q91X79 266 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Spcs1Q9D958 161 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Tmem25Q9DCF1 365 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 SelenokQ9JLJ1 94 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm27027S4R1M6 97 aa8.21□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav6n-5A0A075B621 112 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Trav6-5A0A075B6B5 112 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm867A0A1W2P7T4 151 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 2410141K09RikK7N769 464 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Otx2P80206 289 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Prss57Q14B24 284 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 B020031M17RikQ3UT11 173 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Rhox10Q4TU83 196 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 NnatQ61979 81 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Lypd6Q8BPP5 171 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Snx22Q8C084 192 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 RnasekQ8K3C0 98 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Prr13Q9CQJ5 137 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Q9CR34 168 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Necap1Q9CR95 275 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm10306Q9CUK2 115 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 CsQ9CZU6 464 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Avpi1Q9D7H4 142 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Tmem126aQ9D8Y1 196 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ldb3Q9JKS4 723 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Crim1Q9JLL0 1037 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Adh4Q9QYY9 377 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm13769A2ATW2 309 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Olfr430E9Q5F1 317 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20532G3UXR8 106 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 mt-Co3P00416 261 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 P01822 137 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Iglc3P01845 104 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp2P08043 459 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Igll1P20764 209 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 PtgfrP43117 366 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Hist1h1eP43274 219 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Sox18P43680 377 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp386Q1WWJ5 626 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Shisa6Q3UH99 525 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm10840Q3V2K9 103 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ms4a13Q5FWC3 203 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Dhrs13Q5SS80 376 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Reep5Q60870 185 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Vdac3Q60931 283 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 AI987944Q7TPX5 406 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Iba57Q8CAK1 358 aaKnown RBP8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Mansc1Q9CR33 414 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Mrps28Q9CY16 186 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Ssbp2Q9CYZ8 361 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 9230110F15RikQ9D262 117 aa8.21□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Dock7Q8R1A4 2130 aaKnown RBP8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm29049A0A087WSM5 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Lrrc3cA0A1B0GRI5 255 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm11361A0A1Y7VKY1 152 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm10260F6YVP7 152 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm21118J3QPK8 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Rps18P62270 152 aaKnown RBP8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Tmem217Q14AF1 189 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Jsrp1Q3MI48 332 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20909Q5FWB5 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20852Q5M8R5 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Vmn1r195Q5SVD6 316 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Cd6Q61003 665 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Usf1Q61069 310 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20917Q62457 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20809Q62458 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20865Q62460 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20738Q810R8 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Fam174bQ8K064 153 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Gm20806Q9D9T3 227 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 St6galnac6Q9JM95 333 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Wfdc16A2A5H4 111 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Zfp456B2RUK9 458 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 P01803 113 aa8.2□□□□□ -1.1
Hmgb1-201ENSMUST00000085546 Saa1P05366 122 aa8.2□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms