RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 METRNQ9UJH8 293 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 SPTAN1Q13813 2472 aaKnown RBP9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A10PA6NDY2 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A18PA6NE21 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A16PA6NEW6 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A20PA6NIJ5 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A8PA6NJQ4 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A7PA6NKC0 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A22PA8MWA6 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A12PA8MX19 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A5PA8MXJ8 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A23PA8MXZ1 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A15PP0C7V4 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A13PP0C7W8 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A14PP0C7W9 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 FAM90A24PP0C7X0 464 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 ZNF502Q8TBZ5 544 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 PSG8Q9UQ74 426 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 INSIG2Q9Y5U4 225 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 IQCF6A8MYZ5 107 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 RPL7P18124 248 aaKnown RBP9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 ZC2HC1BQ5TFG8 222 aa9.54□□□□□ -0.88
RBFOX1-224ENST00000641259 A0A1B0GUT8 65 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 VSTM5A8MXK1 200 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 DLL1O00548 723 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 SNCGO76070 127 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 IL4P05112 153 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 TWIST1Q15672 202 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 TTC9CQ8N5M4 171 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 ZNF747Q9BV97 191 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 APOBEC3AP31941 199 aaPredicted RBP9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 ERHP84090 104 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 GAGE5Q13069 117 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 GAGE6Q13070 117 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 AMN1Q8IY45 258 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 URB1-AS1Q96HZ7 61 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 HIF1ANQ9NWT6 349 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 M0R1B8 84 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 EMP1P54849 157 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 LOXL3P58215 753 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 HSPE1P61604 102 aaKnown RBP9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 SPRNQ5BIV9 151 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 GFRALQ6UXV0 394 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 OR9G4Q8NGQ1 327 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
RBFOX1-224ENST00000641259 ZNF497Q6ZNH5 498 aa9.52□□□□□ -0.88
RBFOX1-224ENST00000641259 GPR82Q96P67 336 aa9.52□□□□□ -0.88
RBFOX1-224ENST00000641259 PGPEP1Q9NXJ5 209 aa9.52□□□□□ -0.88
RBFOX1-224ENST00000641259 GAGE2BQ13066 116 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 TMEM249Q2WGJ8 235 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 GAGE2EQ4V326 116 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 C10orf55Q5SWW7 151 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 C11orf53Q8IXP5 236 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 ZBTB34Q8NCN2 500 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 ZNRF1Q8ND25 227 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 TRBV7-9A0A0J9YWB2 115 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 VWC2LB2RUY7 222 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 CD40P25942 277 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 EXOC3-AS1Q8N2X6 119 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 COQ2Q96H96 371 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 SPANXB1Q9NS25 103 aaPredicted RBP9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 ZNRD1Q9P1U0 126 aa9.52□□□□□ -0.89
RBFOX1-224ENST00000641259 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 RBP4P02753 201 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 FAM201AQ5SY85 155 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 C11orf52Q96A22 123 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 SLC25A33Q9BSK2 321 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 UBTD1Q9HAC8 227 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 TMEM213A2RRL7 107 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 SCGB1A1P11684 91 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 IGHV3-72A0A0B4J1Y9 119 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 IGLV2-8P01709 118 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 ID1P41134 155 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 ERVK11-1P61568 191 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 CACNG8Q8WXS5 425 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 RPEQ96AT9 228 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 LY96Q9Y6Y9 160 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 COL12A1Q99715 3063 aa9.51□□□□□ -0.89
RBFOX1-224ENST00000641259 PRRG2O14669 202 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 MRPL23Q16540 153 aaKnown RBP9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 Q6P435 159 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 LINC00322Q6ZN03 302 aaPredicted RBP9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 GTSF1Q8WW33 167 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 KIR2DL4Q99706 377 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 PKIBQ9C010 78 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 EPDR1Q9UM22 224 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 S4R3C0 116 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 LEPP41159 167 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 J3KRW8 73 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 MGST3O14880 152 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 SSBP2P81877 361 aaPredicted RBP9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 NDFIP1Q9BT67 221 aa9.5□□□□□ -0.89
RBFOX1-224ENST00000641259 F8W1H4 67 aa9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 ORM1P02763 201 aa9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 PRB3Q04118 309 aaPredicted RBP9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 LINC01545Q5VT33 79 aa9.49□□□□□ -0.89
RBFOX1-224ENST00000641259 PPP1R35Q8TAP8 253 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms