RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 C16orf54Q6UWD8 224 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 OR4B1Q8NGF8 309 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 PGLYRP4Q96LB8 373 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 ASCL2Q99929 193 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 FAM231BA6NCW3 169 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 SH2D7A6NKC9 451 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-211ENST00000641213 LINC01548A6NM66 108 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
PHGDH-211ENST00000641213 ZNF502Q8TBZ5 544 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 CCL19Q99731 98 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 AAMDCQ9H7C9 122 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 RABAC1Q9UI14 185 aa13.3□□□□□ -0.28
PHGDH-211ENST00000641213 SOX21Q9Y651 276 aaPredicted RBP13.3□□□□□ -0.28
PHGDH-211ENST00000641213 CACNA1BQ00975 2339 aa13.29□□□□□ -0.28
PHGDH-211ENST00000641213 TMEM8BA6NDV4 472 aa13.29□□□□□ -0.28
PHGDH-211ENST00000641213 REC114Q7Z4M0 266 aa13.29□□□□□ -0.28
PHGDH-211ENST00000641213 OR2D3Q8NGH3 330 aa13.29□□□□□ -0.28
PHGDH-211ENST00000641213 PIMREGQ9BSJ6 248 aa13.29□□□□□ -0.28
PHGDH-211ENST00000641213 IGHV4-61A0A0C4DH41 118 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 ZNF705FA8MVS1 300 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 ZNF705DP0CH99 300 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 ZNF705BP0CI00 300 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 RPL7P18124 248 aaKnown RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 RHOGP84095 191 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 ALKBH7Q9BT30 221 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 IGHV3OR16-10A0A075B7F0 116 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 G3V318 75 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 GPR183P32249 361 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 AMTP48728 403 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 PSG9Q00887 426 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
PHGDH-211ENST00000641213 C5orf56Q8N8D9 126 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 RNF114Q9Y508 228 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 IGSF10Q6WRI0 2623 aa13.28□□□□□ -0.28
PHGDH-211ENST00000641213 IGHV3-35A0A0C4DH35 117 aa13.27□□□□□ -0.28
PHGDH-211ENST00000641213 ZNF324O75467 553 aaPredicted RBP13.27□□□□□ -0.28
PHGDH-211ENST00000641213 PRR31Q5SQ13 230 aa13.27□□□□□ -0.28
PHGDH-211ENST00000641213 C10orf105Q8TEF2 133 aa13.27□□□□□ -0.28
PHGDH-211ENST00000641213 NRN1Q9NPD7 142 aa13.27□□□□□ -0.28
PHGDH-211ENST00000641213 SMAD5-AS1Q9Y6J3 95 aa13.27□□□□□ -0.28
PHGDH-211ENST00000641213 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
PHGDH-211ENST00000641213 GOSR1O95249 250 aa13.27□□□□□ -0.29
PHGDH-211ENST00000641213 PMCHP20382 165 aa13.27□□□□□ -0.29
PHGDH-211ENST00000641213 TOMM20LQ6UXN7 152 aa13.27□□□□□ -0.29
PHGDH-211ENST00000641213 IGHV1-69DA0A0B4J2H0 117 aa13.26□□□□□ -0.29
PHGDH-211ENST00000641213 IGHV1-69P01742 117 aa13.26□□□□□ -0.29
PHGDH-211ENST00000641213 CLEC3BP05452 202 aa13.26□□□□□ -0.29
PHGDH-211ENST00000641213 CSN1S1P47710 185 aa13.26□□□□□ -0.29
PHGDH-211ENST00000641213 FOXA3P55318 350 aaPredicted RBP13.26□□□□□ -0.29
PHGDH-211ENST00000641213 C1orf194Q5T5A4 169 aa13.26□□□□□ -0.29
PHGDH-211ENST00000641213 TMEM219Q86XT9 240 aa13.26□□□□□ -0.29
PHGDH-211ENST00000641213 CRIP1P50238 77 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 CCDC140Q96MF4 163 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 C8orf49Q96NF6 230 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 ZFAND3Q9H8U3 227 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 SERTM2A0A1B0GWG4 89 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 APOHP02749 345 aaPredicted RBP13.25□□□□□ -0.29
PHGDH-211ENST00000641213 BRD3OSQ6XYD6 125 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 FAM19A2Q8N3H0 131 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 PIFOQ8TCI5 191 aa13.25□□□□□ -0.29
PHGDH-211ENST00000641213 NIT1Q86X76 327 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 NDUFAF3Q9BU61 184 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 MOB4Q9Y3A3 225 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 TRAV40A0A0B4J280 105 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 KIR2DL5BA0A0G2JN68 375 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 KIR2DL5BA0A0G2JPC4 375 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 HAX1O00165 279 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 NDUFS8O00217 210 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 S100A7P31151 101 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 KRTDAPP60985 99 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 CLEC19AQ6UXS0 136 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 KIR2DL5AQ8N109 375 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 ARL6IP6Q8N6S5 226 aa13.24□□□□□ -0.29
PHGDH-211ENST00000641213 FLNCQ14315 2725 aa13.23□□□□□ -0.29
PHGDH-211ENST00000641213 IGKV2-40A0A087WW87 121 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-211ENST00000641213 IGKV2D-40P01614 121 aaPredicted RBP13.23□□□□□ -0.29
PHGDH-211ENST00000641213 ATP5J2P56134 94 aa13.23□□□□□ -0.29
PHGDH-211ENST00000641213 TDRG1Q3Y452 100 aa13.23□□□□□ -0.29
PHGDH-211ENST00000641213 CLEC2AQ6UVW9 174 aa13.23□□□□□ -0.29
PHGDH-211ENST00000641213 VPS13CQ709C8 3753 aa13.23□□□□□ -0.29
PHGDH-211ENST00000641213 CHEK1O14757 476 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 IGHG4P01861 327 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 RNF224P0DH78 156 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 NTF3P20783 257 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 Q8N976 141 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 EEF1AKMT3Q96AZ1 226 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 ZFHX3Q15911 3703 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 IGHV4-30-2A0A087WSY4 118 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 IGFL4Q6B9Z1 124 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 MEGF9Q9H1U4 602 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 DOPEY1Q5JWR5 2465 aa13.22□□□□□ -0.29
PHGDH-211ENST00000641213 COL12A1Q99715 3063 aa13.21□□□□□ -0.29
PHGDH-211ENST00000641213 TRBV7-1A0A0A6YYK4 115 aa13.21□□□□□ -0.29
PHGDH-211ENST00000641213 CLPSL1A2RUU4 121 aa13.21□□□□□ -0.29
PHGDH-211ENST00000641213 BUB3O43684 328 aa13.21□□□□□ -0.29
PHGDH-211ENST00000641213 CT45A10P0DMU9 189 aa13.21□□□□□ -0.29
PHGDH-211ENST00000641213 CELSR1Q9NYQ6 3014 aa13.21□□□□□ -0.3
PHGDH-211ENST00000641213 LOC102724200A0A096LPH7 203 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms