RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 TNFSF18Q9UNG2 199 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 CYSLTR1Q9Y271 337 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 HS3ST2Q9Y278 367 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 AP4S1Q9Y587 144 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 MAST2Q6P0Q8 1798 aa1.15□□□□□ -2.23
CCDC7-216ENST00000640058 MYOFQ9NZM1 2061 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HEATR5BQ9P2D3 2071 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 CAMSAP2Q08AD1 1489 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 RAPGEF2Q9Y4G8 1499 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ANKRD36BQ8N2N9 1353 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 TLCD2A6NGC4 264 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 GGT3PA6NGU5 568 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 H3BT86 120 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 GABARAPH6UMI1 98 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 I3L521 148 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 CDC42EP2O14613 210 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 NPFFO15130 113 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 LEPROTO15243 131 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 NDUFB3O43676 98 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 OR2T1O43869 369 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF737O75373 536 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 PGLYRP1O75594 196 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SRP19P09132 144 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF705BP0CI00 300 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 FABP2P12104 132 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HLA-EP13747 358 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H1BP16401 226 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BOP23527 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BBP33778 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF93P35789 620 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SRP14P37108 136 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 AQP4P55087 323 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BDP58876 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 S100A10P60903 97 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 YPEL3P61236 119 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BCP62807 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 EIF5AP63241 154 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SLC38A11Q08AI6 406 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST2H2BEQ16778 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 NCMAPQ5T1S8 102 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 RPL22L1Q6P5R6 122 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HRCT1Q6UXD1 115 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF705AQ6ZN79 300 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 LINC00305Q7Z4B0 112 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SNX29P2Q8IUI4 249 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 C4orf33Q8N1A6 199 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SVBPQ8N300 66 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 C10orf126Q8N4M7 172 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 RPP25LQ8N5L8 163 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 TEX29Q8N6K0 151 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 OR2T10Q8NGZ9 312 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 PP6455Q8WZ26 134 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BHQ93079 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 RAB37Q96AX2 223 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 YPEL2Q96QA6 119 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BNQ99877 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 HIST1H2BMQ99879 126 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 MRPL57Q9BQC6 102 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 ADAT1Q9BUB4 502 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 C11orf68Q9H3H3 251 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SLC39A9Q9NUM3 307 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 SCN3BQ9NY72 215 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 TAS2R8Q9NYW2 309 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 METTL1Q9UBP6 276 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 NOP16Q9Y3C1 178 aaKnown RBP1.14□□□□□ -2.23
CCDC7-216ENST00000640058 TIMM9Q9Y5J7 89 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 MYH3P11055 1940 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 TECPR2O15040 1411 aa1.14□□□□□ -2.23
CCDC7-216ENST00000640058 MICAL3Q7RTP6 2002 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 MYH2Q9UKX2 1941 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 KTN1Q86UP2 1357 aaKnown RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 ROBO3Q96MS0 1386 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM2Q9UHN6 1383 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TRAV13-1A0A0B4J241 112 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 A0A0G2JMM0 328 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 A0A1B0GW64 132 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 A0A1W2PPB8 328 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 OR2T8A6NH00 312 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM212A6NML5 194 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 KIR3DP1A8MWS1 328 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 A8MWV9 139 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TAX1BP3O14907 124 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 C1QAP02745 245 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TRGC2P03986 189 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 IGLC6P0CF74 106 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 CSN1S1P47710 185 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TMBIM6P55061 237 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM258P61165 79 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 HSD52Q0P140 79 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 RRN3P1Q2M238 152 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 CCSMST1Q4G0I0 132 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 MEIG1Q5JSS6 88 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 GLYATL3Q5SZD4 288 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 TMEM244Q5VVB8 128 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 C1orf140Q5VVS0 124 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 EIF5AL1Q6IS14 154 aaKnown RBP1.13□□□□□ -2.23
CCDC7-216ENST00000640058 GLIPR1L1Q6UWM5 242 aa1.13□□□□□ -2.23
CCDC7-216ENST00000640058 LCN15Q6UWW0 184 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms