RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	RPRM	Q9NS64	109 aa		6.15	□□□□□ -1.42
SPTAN1-238	ENST00000637903	PLA2G2E	Q9NZK7	142 aa		6.15	□□□□□ -1.42
SPTAN1-238	ENST00000637903	MLX	Q9UH92	298 aa		6.15	□□□□□ -1.42
SPTAN1-238	ENST00000637903	RNF24	Q9Y225	148 aa		6.15	□□□□□ -1.42
SPTAN1-238	ENST00000637903	FUT9	Q9Y231	359 aa		6.15	□□□□□ -1.42
SPTAN1-238	ENST00000637903	TRAV5	A0A0B4J249	113 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TRAV25	A0A0B4J276	109 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	LY6G6C	O95867	125 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ATF4	P18848	351 aa	Predicted RBP	6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	CDC34	P49427	236 aa	Predicted RBP	6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ALKAL2	Q6UX46	152 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	DPPA3	Q6W0C5	159 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	MIR17HG	Q75NE6	70 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	OR8I2	Q8N0Y5	310 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RPP25L	Q8N5L8	163 aa	Known RBP	6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	GLMP	Q8WWB7	406 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	GPR82	Q96P67	336 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SLC25A2	Q9BXI2	301 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ACTR3C	Q9C0K3	210 aa	Predicted RBP	6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TP53TG1	Q9Y2A0	90 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SELENOK	Q9Y6D0	94 aa		6.14	□□□□□ -1.43
SPTAN1-238	ENST00000637903	HECTD4	Q9Y4D8	3996 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	CTXND1	A0A1B0GTU2	59 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	NUPR2	A6NF83	97 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	HELT	A6NFD8	242 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	CD5	P06127	495 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RPL7	P18124	248 aa	Known RBP	6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SULT1A2	P50226	295 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RAB5C	P51148	216 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TAS2R45	P59539	299 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RPL11	P62913	178 aa	Known RBP	6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	KHDC3L	Q587J8	217 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	FAM74A1	Q5RGS3	127 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	FAM90A2P	Q658T7	463 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TEX261	Q6UWH6	196 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SIGLEC15	Q6ZMC9	328 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903		Q6ZWC4	215 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TCF24	Q7RTU0	167 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	BPIFA4P	Q86YQ2	179 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	FAM213B	Q8TBF2	198 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RAB24	Q969Q5	203 aa		6.13	□□□□□ -1.43
SPTAN1-238	ENST00000637903		A0A0J9YWU9	116 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	UBE2C	O00762	179 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	MRPS12	O15235	138 aa	Known RBP	6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	HMGB3	O15347	200 aa	Known RBP	6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	OR7C2	O60412	319 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	EIF3G	O75821	320 aa	Known RBP eCLIP	6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	STAG3L2	P0CL84	134 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	STAG3L3	P0CL85	134 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	GALR1	P47211	349 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	FHIT	P49789	147 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ZNF726P1	Q15940	193 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	PQLC2	Q6ZP29	291 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RBPMS2	Q6ZRY4	209 aa	Known RBP	6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SSX7	Q7RTT5	188 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	STXBP6	Q8NFX7	210 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	RNF141	Q8WVD5	230 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	FAM167A-AS1	Q96KT0	104 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	PAXX	Q9BUH6	204 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	OR51M1	Q9H341	326 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TMEM14C	Q9P0S9	112 aa		6.12	□□□□□ -1.43
SPTAN1-238	ENST00000637903	IGKV3-7	A0A075B6H7	116 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903		A0A087X0K7	114 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	MAP1LC3B2	A6NCE7	125 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	CXorf65	A6NEN9	183 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TSPAN4	O14817	238 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SPRY2	O43597	315 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	CXorf1	O96002	111 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	IFNA7	P01567	189 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	H2AFB1	P0C5Y9	115 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	OR10J4	P0C629	311 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ARL14EPL	P0DKL9	152 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	PYY	P10082	97 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	PAFAH1B2	P68402	229 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	PMS2P11	Q13670	270 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	LCN15	Q6UWW0	184 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ZNF680	Q8NEM1	530 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	ZNF503	Q96F45	646 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	MAP1LC3B	Q9GZQ8	125 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	MS4A6A	Q9H2W1	248 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	NRN1	Q9NPD7	142 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	UBQLN2	Q9UHD9	624 aa		6.11	□□□□□ -1.43
SPTAN1-238	ENST00000637903	KIR2DL5B	A0A0G2JN68	375 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	KIR2DL5B	A0A0G2JPC4	375 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903		H3BQ15	152 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	DNASE2	O00115	360 aa	Predicted RBP	6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	SNRPC	P09234	159 aa	Known RBP	6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	IGLC2	P0DOY2	106 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	HIST1H1E	P10412	219 aa	Known RBP	6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	GCHFR	P30047	84 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	TFPI2	P48307	235 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	MEOX2	P50222	304 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	APOC4	P55056	127 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	FGF8	P55075	233 aa	Predicted RBP	6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	UBE2L3	P68036	154 aa	Known RBP	6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	GUK1	Q16774	197 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		6.1	□□□□□ -1.43
SPTAN1-238	ENST00000637903	IQCF2	Q8IXL9	164 aa		6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms