RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 SNRPD3P62318 126 aaKnown RBP11.9□□□□□ -0.5
CLN6-216ENST00000636876 DEFB125Q8N687 156 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 TMED6Q8WW62 240 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 C16orf92Q96LL3 132 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 PAXXQ9BUH6 204 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 ACTR3CQ9C0K3 210 aaPredicted RBP11.9□□□□□ -0.5
CLN6-216ENST00000636876 OR51M1Q9H341 326 aa11.9□□□□□ -0.5
CLN6-216ENST00000636876 BOLA2-SMG1P6H3BVE0 249 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 SNRPCP09234 159 aaKnown RBP11.89□□□□□ -0.51
CLN6-216ENST00000636876 DEFB131AP59861 70 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 GUK1Q16774 197 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 LCN15Q6UWW0 184 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 ZNF586Q9NXT0 402 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 PLA2G2EQ9NZK7 142 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 BOLA1Q9Y3E2 137 aa11.89□□□□□ -0.51
CLN6-216ENST00000636876 TRAV8-2A0A0B4J237 113 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 UMAD1C9J7I0 102 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 H3BTX0 84 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 ZNF726P1Q15940 193 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 PSMG4Q5JS54 123 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 EIF5AL1Q6IS14 154 aaKnown RBP11.88□□□□□ -0.51
CLN6-216ENST00000636876 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 LRRC20Q8TCA0 184 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 MRAPQ8TCY5 172 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 RNF141Q8WVD5 230 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 FXYD5Q96DB9 178 aa11.88□□□□□ -0.51
CLN6-216ENST00000636876 SAT2Q96F10 170 aaPredicted RBP11.88□□□□□ -0.51
CLN6-216ENST00000636876 TRBV19A0A075B6N1 114 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 CTXND1A0A1B0GTU2 59 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 SLC17A3O00476 420 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
CLN6-216ENST00000636876 ZNF253O75346 499 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 OR10J4P0C629 311 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 NBEAP1P0C6P0 100 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 STAG3L2P0CL84 134 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 STAG3L3P0CL85 134 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 IGHV4-30-4P0DP06 118 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 UBE2L3P68036 154 aaKnown RBP11.87□□□□□ -0.51
CLN6-216ENST00000636876 SSX7Q7RTT5 188 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 APRG1Q8IVJ8 170 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 C20orf173Q96LM9 149 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 TUBA4BQ9H853 241 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 SRD5A3Q9H8P0 318 aa11.87□□□□□ -0.51
CLN6-216ENST00000636876 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
CLN6-216ENST00000636876 A8MZ25 164 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 ARL14EPLP0DKL9 152 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 PDE6HQ13956 83 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 ZNF124Q15973 351 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 DEFB121Q5J5C9 76 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 BLNKQ8WV28 456 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 CITED4Q96RK1 184 aa11.86□□□□□ -0.51
CLN6-216ENST00000636876 NDUFB4O95168 129 aa11.85□□□□□ -0.51
CLN6-216ENST00000636876 FHITP49789 147 aa11.85□□□□□ -0.51
CLN6-216ENST00000636876 DPPA3Q6W0C5 159 aa11.85□□□□□ -0.51
CLN6-216ENST00000636876 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
CLN6-216ENST00000636876 FAM213BQ8TBF2 198 aa11.85□□□□□ -0.51
CLN6-216ENST00000636876 CXorf1O96002 111 aa11.84□□□□□ -0.51
CLN6-216ENST00000636876 HLA-DMBP28068 263 aa11.84□□□□□ -0.51
CLN6-216ENST00000636876 GCHFRP30047 84 aa11.84□□□□□ -0.51
CLN6-216ENST00000636876 PSG3Q16557 428 aa11.84□□□□□ -0.51
CLN6-216ENST00000636876 CLEC5AQ9NY25 188 aa11.84□□□□□ -0.51
CLN6-216ENST00000636876 MAP1LC3B2A6NCE7 125 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 KNCNA6PVL3 124 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 SULT1A2P50226 295 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 RAB5CP51148 216 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 DEFB1P60022 68 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 PSG9Q00887 426 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 ZNF738Q8NE65 137 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 PHYHIPLQ96FC7 376 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 MAP1LC3BQ9GZQ8 125 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 AGRNO00468 2067 aa11.83□□□□□ -0.52
CLN6-216ENST00000636876 RBMY1BA6NDE4 496 aaKnown RBP11.82□□□□□ -0.52
CLN6-216ENST00000636876 RBMY1EA6NEQ0 496 aaKnown RBP11.82□□□□□ -0.52
CLN6-216ENST00000636876 RBMY1DP0C7P1 496 aaKnown RBP11.82□□□□□ -0.52
CLN6-216ENST00000636876 FRMD6-AS1P0C7T7 363 aa11.82□□□□□ -0.52
CLN6-216ENST00000636876 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
CLN6-216ENST00000636876 ACTL10Q5JWF8 245 aa11.82□□□□□ -0.52
CLN6-216ENST00000636876 LINC00322Q6ZN03 302 aaPredicted RBP11.82□□□□□ -0.52
CLN6-216ENST00000636876 FOXI2Q6ZQN5 318 aa11.82□□□□□ -0.52
CLN6-216ENST00000636876 SUN5Q8TC36 379 aa11.82□□□□□ -0.52
CLN6-216ENST00000636876 MBD3L1Q8WWY6 194 aa11.82□□□□□ -0.52
CLN6-216ENST00000636876 TMEM167BQ9NRX6 74 aa11.82□□□□□ -0.52
CLN6-216ENST00000636876 ALKAL2Q6UX46 152 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 STHQ8IWL8 128 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 LYPD1Q8N2G4 141 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 EXOC3-AS1Q8N2X6 119 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 MRPL53Q96EL3 112 aaKnown RBP11.81□□□□□ -0.52
CLN6-216ENST00000636876 SAV1Q9H4B6 383 aaPredicted RBP11.81□□□□□ -0.52
CLN6-216ENST00000636876 AAMDCQ9H7C9 122 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 PRELID1Q9Y255 219 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 NBEAL2Q6ZNJ1 2754 aa11.81□□□□□ -0.52
CLN6-216ENST00000636876 LOC102724200A0A096LPH7 203 aaPredicted RBP11.8□□□□□ -0.52
CLN6-216ENST00000636876 A0A0J9YX75 114 aa11.8□□□□□ -0.52
CLN6-216ENST00000636876 F6UB75 175 aa11.8□□□□□ -0.52
CLN6-216ENST00000636876 H3BMM0 161 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms