RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 GOLT1AQ6ZVE7 132 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 FOXC2Q99958 501 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 V9GYV3 84 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 ACANP16112 2415 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 HECTD1Q9ULT8 2610 aa12.21□□□□□ -0.45
CACNA1A-231ENST00000636816 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 RPL7P18124 248 aaKnown RBP12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 RELQ04864 619 aaPredicted RBP12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 UNQ9165/PRO28630Q6UXU0 137 aa12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 OR4X2Q8NGF9 303 aa12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 CMTM2Q8TAZ6 248 aa12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 ASCL2Q99929 193 aa12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF702PQ9H963 129 aa12.21□□□□□ -0.46
CACNA1A-231ENST00000636816 C5orf52A6NGY3 159 aa12.2□□□□□ -0.46
CACNA1A-231ENST00000636816 GGCTO75223 188 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-231ENST00000636816 IGLV2-11P01706 119 aa12.2□□□□□ -0.46
CACNA1A-231ENST00000636816 ATP6V0BQ99437 205 aa12.2□□□□□ -0.46
CACNA1A-231ENST00000636816 FASNP49327 2511 aaKnown RBP12.2□□□□□ -0.46
CACNA1A-231ENST00000636816 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
CACNA1A-231ENST00000636816 IGHG4P01861 327 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 PSMB8P28062 276 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 LYPD1Q8N2G4 141 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 PRSS22Q9GZN4 317 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 FOXL1Q12952 345 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 KCNIP4Q6PIL6 250 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 FMC1Q96HJ9 113 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 OSTCQ9NRP0 149 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 IL36BQ9NZH7 164 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF580Q9UK33 172 aa12.19□□□□□ -0.46
CACNA1A-231ENST00000636816 IBA57Q5T440 356 aaKnown RBP12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 PRR27Q6MZM9 219 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 GPR82Q96P67 336 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 METTL26Q96S19 204 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 IMMP2LQ96T52 175 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 MLST8Q9BVC4 326 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 U3KQE9 123 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF785A8K8V0 405 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 DIRC3C9JPN6 131 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 LTAP01374 205 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 PDE6HQ13956 83 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 LINC00322Q6ZN03 302 aaPredicted RBP12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 PRNTQ86SH4 94 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 SERTAD4Q9NUC0 356 aa12.18□□□□□ -0.46
CACNA1A-231ENST00000636816 A0A0G2JLM5 398 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF320A2RRD8 509 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 UBE2CO00762 179 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 PHOX2AO14813 284 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 SNRPEP62304 92 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 NUDT10Q8NFP7 164 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 SVIPQ8NHG7 77 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 FRZBQ92765 325 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 NUDT11Q96G61 164 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 AAMDCQ9H7C9 122 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 SRD5A3Q9H8P0 318 aa12.17□□□□□ -0.46
CACNA1A-231ENST00000636816 RPLP1P05386 114 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 S100A9P06702 114 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 Q86TA4 180 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 NPFFR1Q9GZQ6 430 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 YAE1D1Q9NRH1 226 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF705FA8MVS1 300 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 NDUFA4O00483 81 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 S100A6P06703 90 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 FRMD6-AS1P0C7T7 363 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 PSG9Q00887 426 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 RPEL1Q2QD12 228 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.16□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF705GA8MUZ8 300 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-231ENST00000636816 S100A7P31151 101 aa12.15□□□□□ -0.46
CACNA1A-231ENST00000636816 AKR1D1P51857 326 aa12.15□□□□□ -0.46
CACNA1A-231ENST00000636816 TCL1AP56279 114 aa12.15□□□□□ -0.46
CACNA1A-231ENST00000636816 ZNF331Q9NQX6 463 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-231ENST00000636816 CD5LO43866 347 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BKO60814 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BJP06899 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BOP23527 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BBP33778 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BDP58876 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BCP62807 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST2H2BEQ16778 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 C1orf194Q5T5A4 169 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 RNF182Q8N6D2 247 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BHQ93079 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BNQ99877 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 HIST1H2BMQ99879 126 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 PEF1Q9UBV8 284 aaKnown RBP12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 IGKV2-40A0A087WW87 121 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 A0A087X0K7 114 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 SPINK4O60575 86 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 IGKV2D-40P01614 121 aaPredicted RBP12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 TYMSP04818 313 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 PSG3Q16557 428 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 TMEM75Q8N9X5 138 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 SELENOKQ9Y6D0 94 aa12.14□□□□□ -0.47
CACNA1A-231ENST00000636816 GATCO43716 136 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms