RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 EBLN2Q6P2I7 272 aa3.6□□□□□ -1.83
SCN1A-210ENST00000635776 CLEC19AQ6UXS0 136 aa3.6□□□□□ -1.83
SCN1A-210ENST00000635776 SIGLEC15Q6ZMC9 328 aa3.6□□□□□ -1.83
SCN1A-210ENST00000635776 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
SCN1A-210ENST00000635776 MLST8Q9BVC4 326 aa3.6□□□□□ -1.83
SCN1A-210ENST00000635776 CNTFRP26992 372 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 KLRD1Q13241 179 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 SYT8Q8NBV8 401 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 C10orf105Q8TEF2 133 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 C14orf144Q96I85 54 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 IGHV7-81A0A0B4J1V7 117 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 RPLP1P05386 114 aaKnown RBP3.59□□□□□ -1.83
SCN1A-210ENST00000635776 C18orf32Q8TCD1 76 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 DPF1Q92782 380 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 C1orf159Q96HA4 380 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 PRR25Q96S07 402 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 HIVEP3Q5T1R4 2406 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 NCKAP5O14513 1909 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 TNCP24821 2201 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 CHD7Q9P2D1 2997 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 SH2D7A6NKC9 451 aaPredicted RBP3.59□□□□□ -1.83
SCN1A-210ENST00000635776 K7EMI3 77 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 TWIST1Q15672 202 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 ALKBH7Q9BT30 221 aaPredicted RBP3.59□□□□□ -1.83
SCN1A-210ENST00000635776 NPIPB6E9PJ23 425 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 ATP6V0E1O15342 81 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 IGLC2P0DOY2 106 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 CMC4P56277 68 aaPredicted RBP3.59□□□□□ -1.83
SCN1A-210ENST00000635776 GFI1BQ5VTD9 330 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 Q6ZN92 141 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 Q8N9W7 124 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 C19orf71A6NCJ1 209 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 LEPP41159 167 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 SLC25A34Q6PIV7 304 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 MEGF9Q9H1U4 602 aa3.59□□□□□ -1.83
SCN1A-210ENST00000635776 CNOT1A5YKK6 2376 aaKnown RBP3.59□□□□□ -1.84
SCN1A-210ENST00000635776 ASIPP42127 132 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 LMO4P61968 165 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 SPATA45Q537H7 98 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 HBDP02042 147 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 DAZ1Q9NQZ3 744 aaKnown RBP3.59□□□□□ -1.84
SCN1A-210ENST00000635776 COL27A1Q8IZC6 1860 aaPredicted RBP3.59□□□□□ -1.84
SCN1A-210ENST00000635776 TRAV40A0A0B4J280 105 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 OVOL3O00110 214 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 GRNP28799 593 aaKnown RBP3.59□□□□□ -1.84
SCN1A-210ENST00000635776 SMAGPQ0VAQ4 97 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 KLK9Q2XQG4 91 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 KIAA1644Q3SXP7 199 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 SGK494Q96LW2 274 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 PEMTQ9UBM1 199 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 KLK9Q9UKQ9 250 aa3.59□□□□□ -1.84
SCN1A-210ENST00000635776 PLXNB1O43157 2135 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 CGB1A6NKQ9 187 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 IGF1P05019 195 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 CTSGP08311 255 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 CRIP2P52943 208 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-210ENST00000635776 MYOZ3Q8TDC0 251 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 AJUBAQ96IF1 538 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 FANCD2OSQ96PS1 177 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 ARHGAP21Q5T5U3 1957 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 A0A1B0GV90 55 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 PAPPA-AS1Q5QFB9 102 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 LRRC75A-AS1Q8N1F1 130 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 LCN12Q6JVE5 192 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 TEX43Q6ZNM6 134 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 NIT1Q86X76 327 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 VPS25Q9BRG1 176 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 E7EUB6 86 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 IGLV2-8P01709 118 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 ELANEP08246 267 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 LEMD1Q68G75 181 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 TMEM256Q8N2U0 113 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 EXOC3-AS1Q8N2X6 119 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 K7EMT4 169 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 TM4SF20Q53R12 229 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 APOHP02749 345 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-210ENST00000635776 ORMDL2Q53FV1 153 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 OR1N2Q8NGR9 330 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 PAM16Q9Y3D7 125 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 RIF1Q5UIP0 2472 aaKnown RBP3.58□□□□□ -1.84
SCN1A-210ENST00000635776 FAM181BA6NEQ2 426 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 OR4C46A6NHA9 309 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 TCF21O43680 179 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 IGHG2P01859 326 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 MED14OSP0DP75 135 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 ZNF124Q15973 351 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 C16orf54Q6UWD8 224 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 COX8CQ7Z4L0 72 aa3.58□□□□□ -1.84
SCN1A-210ENST00000635776 CEP350Q5VT06 3117 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 A0A1B0GXF2 115 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 A6NDN8 102 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 H3BTX0 84 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 SH2D1AO60880 128 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 MAJINQ3KP22 176 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 TMEM97Q5BJF2 176 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 ZNF493Q6ZR52 646 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 TIMM8BQ9Y5J9 83 aaPredicted RBP3.57□□□□□ -1.84
SCN1A-210ENST00000635776 KIR2DL5BA0A0G2JN68 375 aa3.57□□□□□ -1.84
SCN1A-210ENST00000635776 KIR2DL5BA0A0G2JPC4 375 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms